| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3973 |
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| Symbol | |
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| ID | 8255107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4785473 |
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| End bp | 4788739 |
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| Gene Length | 3267 bp |
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| Protein Length | 1088 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644937637 |
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| Product | glycoside hydrolase family 2 sugar binding |
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| Protein accession | YP_003094226 |
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| Protein GI | 255533854 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.4327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCTAA TTAAATCATT TTTTTGCCTG ACTTTATTGG CGGCCTGTAC AATCCATACC
TTTGGTCAGG CTGGAAAACA CCGTCAGCAA AATGAGGGCA TGTCTGCGCT GGAAAAAGGC
TTCAAGGTAA CACCCGATAC GATTCAAACC AGTGTATACT GGTACTGGAT GTCGGACAAC
ATCTCAAAAG AAGGGGTGGT CAGGGATCTT AAAGCGATGA AAACTGCGGG CATCAACAGA
GCTTTTATCG GGAATATCGG ATACAATTCT ACCCCATACG GGAAGGTAAA ACTATTTTCT
AAACAATGGT GGGACATCCT CCACCTTGCT TTAAAAACGG CCGGCGAACT CGGAATAGAG
ATCGGCATTT TTAACAGTCC AGGCTGGAGC CAGTCTGGCG GGCCATGGAT CAGGCCAGAG
CAGTCCATGA GGTATCTGAC CTCCTCTGAA ACCCTTATTA AGGGCGGGGG CAGGGTGAAT
GTCTTGCTGG AAAAACCCAA GCCTCAATTT CAGGATGTCA GGGTTGTTGC TTTCAGGGCA
CCTGAAGCTT ATGGCAGTAC GCTTACAGAC CTTCGTCCGG TTCTGACCTC TAAGCCCGAA
TTGCCGCAGC TACAAAATCT GATAGACCGC GATACCTCAA CGGCAATTAC TATAACAGAT
GCCAATCAGG TGAACATAGA CTTCCAGACA GAGAGGGAGT ATACGGCCCG AAGCCTGACA
ATTTATCCGG CCGCTTACCA GATGACCGCT TCTGCCGAGC TTCAGATCAG GGAAGCAGGC
GGTTATCGTA CAATAAGATC CTTTGAAATT GACCGCAGGA GAAATGCCTT AAATGTTGGT
TTCGATCCCT ATGCAGCCAT AGTGATTTCT TTTCCGGCAA GTACTTCAAA GCACTTCCGC
TTAGTTTTGA AAAAAAGCAT GTTGGCCGGC CAGTCTTTCC CTAAATATGG GATCAGGGAA
TTTATCCTTT CTTCTGTGCC CAGGGTTGAG CGGTATGTAG AAAAGACTTT TGCCAAAATG
GTCCAAACAC CCCTTCCTTA TTGGAATGAA TACCAATGGC CTCAGCAGCT CGTAGTTGGG
GATAAAAATT TGTTGATCGA GCCGAAAAAT GTCCTGGATG TATCCCGGTT TATGTCGCCA
GATGGGAACT TTAACTGGGA TGCTCCTGCC GGAGACTGGG TTATTATGAG AATGGGGATG
ACACCGACCG GGGTAAACAA CAGTCCTGCT TCCAGAGAAG GTACGGGCCT GGAAGTTGAT
AAAATGAGCA AGGAACACCT CAGGTCTCAT TTTGACTCCT TTCTTGGAGA AATTTTGAGG
CGCATACCAG CCGCTGACAG AAAGACCTGG AAGGTGGTGG TCCAGGATAG CTACGAAACG
GGGGGACAGA ACTGGACGGA CGGATTGATC GAAAAATTTA AGGCCAGGTA TGGCTATGAT
CCCCTGCCTT ACTTACCTGC CTTACAGGGA AAGGTGGTGG GTAACCCGGA CATGTCCGAT
CGTTTTTTAT GGGATTTAAG AAGGTTCATT GCAGACAAGG TGGCCTATGA TTATGTGGGC
GGACTGCGCG AAATCAGCCA TCAGAACGGC CTCCGCACAT GGCTAGAAAA TTACGGTCAC
TGGGGCTTCC CGGGCGAATT TTTACAATAT GGAGGCCAGT CGGACGAAGT TGCGGGCGAA
TTCTGGGCTG CCGGGGAATT GGGGAATATC GAAAACAGGG CGGCCTCTTC TGCAGCACAT
ATATACGGGA AAACAAAAGT ATCGGCAGAG TCTTTTACCG CAGGTGGCAA ACCGTATATC
CGCTATCCGG CTTACATTAA ACAGCGGGGC GACCGGTTTT TTACTGAAGG GATCAACAAT
ACGCTGCTCC ATGTATTCAT TCAGCAGCCA GATGAAAGGA TGCCCGGTGT TAACGCCAAC
TTTAGTACCG AATTTAACAG GCACAATACC TGGTTCAATT ATCTGGACCT GTTTACAGCC
TATTTAAAAC GATGCAATTT TATGCTCCAG CAAGGAAAGT ACGTGGCAGA TGTAGCTTAT
TTTATTGGAG AAGATGCACC TAAAATGACC GGGATAACCG AACCTGCATT ACCATCCGGA
TATTCTTTTG ATTACATCAA TGCTGAAGTG ATCATAAACC GGCTCTCTGT TAAAAACGGC
CGCCTGTTCT TGCCTGACGG GATGAACTAT GGTTTATTGG TATTGCCTGC ACTGGAAACA
ATACGGCCGG AATTACTTGA AAAAATCCGT AACCTGGTAA GTCAGGGTGC TGCGGTTATG
GGCCCTGCCC CTAAGCGTTC GCCAAGTCTG GAACATTATC CTTTGGCCGA TCAGCACGTG
TCTGCTATGG CAAAAGAACT TTGGGGCAAC ATTAACGGAA CAACCATAAC CTCACGCAAA
TATGGTAAGG GGCAGGTACT TTATGGTACG GATCTTTCCA CTGCATTGAA CAGGCTTAAT
ATCGTTCCTG ACTACAAAAC AAACCATACC GATTCTATAC TTTTTATCCA TCGGACAACA
CCCGAGGCCG AGATCTATTA TGTAAGTAAC CAGAAAAACA AGCCGGTCAG TGTGCTTTCC
GAATTCAGGG TGGGCAATAA GCAGCCGGAG CTTTGGGACC CGGTTGATGG CACAACACGT
GCCCTGCCCC AATACGAACA TAAAAATGGG ATAACTACTA TCCCTTTAAA GCTGGACAAG
CTGCAGAGTA CATTTATTAT CTTTAAAAAA ACCGCTCGCA AAGTACAGCA TACTGGAACA
CTAAATAATC CGGAGGAGCT TACATGGGCA ACAATTGAAA AACCCTGGAA AGTAACCTTT
GACCGTAAGA TGCGCGGTCC TGTACAGCCG GTAATATTTA ATGAGCTGCT CGATTGGACG
CAGCATACCA ATAACGAGAT TAGATATTAT TCCGGTACGG CTGTTTATCG CAATTCTGTT
GAATTAAAGA AAGCCACTGC CGCTCAGCAC GTTTACCTGA ATTTGGGAGA AGTAAAGGTT
ATAGCCAAAG TAAAAGTAAA CGGTGTTGAT GTAGGAGGTG CATGGACAGC ACCATGGAGG
GTAGAGATCA CCAAAGCCAT AAAACCGGGA CTGAACACCA TTGAAATAAG TGTGGCGAAC
ACCTGGGTAA ACCGTCTGAT CGGCGATAGC ATGTTGCCGC CGGAAGAACG GAATACCTGG
ACAAATGACA ACCCTTATCA CCCGAAAAGT ATGCTCGAAC CATCAGGATT AAAAGGCCCG
GTGTTTATAA GCGTGACTAA ATATTAA
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| Protein sequence | MKLIKSFFCL TLLAACTIHT FGQAGKHRQQ NEGMSALEKG FKVTPDTIQT SVYWYWMSDN
ISKEGVVRDL KAMKTAGINR AFIGNIGYNS TPYGKVKLFS KQWWDILHLA LKTAGELGIE
IGIFNSPGWS QSGGPWIRPE QSMRYLTSSE TLIKGGGRVN VLLEKPKPQF QDVRVVAFRA
PEAYGSTLTD LRPVLTSKPE LPQLQNLIDR DTSTAITITD ANQVNIDFQT EREYTARSLT
IYPAAYQMTA SAELQIREAG GYRTIRSFEI DRRRNALNVG FDPYAAIVIS FPASTSKHFR
LVLKKSMLAG QSFPKYGIRE FILSSVPRVE RYVEKTFAKM VQTPLPYWNE YQWPQQLVVG
DKNLLIEPKN VLDVSRFMSP DGNFNWDAPA GDWVIMRMGM TPTGVNNSPA SREGTGLEVD
KMSKEHLRSH FDSFLGEILR RIPAADRKTW KVVVQDSYET GGQNWTDGLI EKFKARYGYD
PLPYLPALQG KVVGNPDMSD RFLWDLRRFI ADKVAYDYVG GLREISHQNG LRTWLENYGH
WGFPGEFLQY GGQSDEVAGE FWAAGELGNI ENRAASSAAH IYGKTKVSAE SFTAGGKPYI
RYPAYIKQRG DRFFTEGINN TLLHVFIQQP DERMPGVNAN FSTEFNRHNT WFNYLDLFTA
YLKRCNFMLQ QGKYVADVAY FIGEDAPKMT GITEPALPSG YSFDYINAEV IINRLSVKNG
RLFLPDGMNY GLLVLPALET IRPELLEKIR NLVSQGAAVM GPAPKRSPSL EHYPLADQHV
SAMAKELWGN INGTTITSRK YGKGQVLYGT DLSTALNRLN IVPDYKTNHT DSILFIHRTT
PEAEIYYVSN QKNKPVSVLS EFRVGNKQPE LWDPVDGTTR ALPQYEHKNG ITTIPLKLDK
LQSTFIIFKK TARKVQHTGT LNNPEELTWA TIEKPWKVTF DRKMRGPVQP VIFNELLDWT
QHTNNEIRYY SGTAVYRNSV ELKKATAAQH VYLNLGEVKV IAKVKVNGVD VGGAWTAPWR
VEITKAIKPG LNTIEISVAN TWVNRLIGDS MLPPEERNTW TNDNPYHPKS MLEPSGLKGP
VFISVTKY
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