Gene Phep_3967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3967 
Symbol 
ID8255101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4777055 
End bp4778212 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content42% 
IMG OID644937631 
ProductFecR protein 
Protein accessionYP_003094220 
Protein GI255533848 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAT CAAACGCGAG GATTCAAGTC CTGCTACAAA ACTATTTCAA TAACCTGAAT 
ACCGAAACGG AAAATGAAGA GCTATGGTCG CATATCATTA CTTCTCACAA CGATCAGGAA
TTGATGCAGC TTTTTCCCGA TGCATTTAGT GACGAAATGG AGGTTCCCGA AAATGCATTG
GATGCCACAA AAAAACAAAC TATTTTAAAC TACATCTACA ATCATCATTT ATTACAAGCA
AGCCATCAGC CTAAAACGCT GAGGTTACTA CCAAAATTGG CGGCGATAGC GGCAGCTGTA
GCTTTGATAA TCTCAGGCGT TTGGTTTTAT GCCGGCAACC CTGTCGCAAA TCGCAATTCA
AAAATCGCGA ATCAAAATGA CATTAAGCCC GGCAAAAACA CAGCCACAAT TACCTTACCA
GGTGGCAGCA GCGTGCAACT AAGCGATGCG AAAAGCGGAG TAGTGATTGA TGCGAGTAAG
ATCACCTATA GTGATGGAAC TACTTTGGAA GGGGATACTT CTTCGCCAGG GCTGCTAAAT
GGAATGACAA CCATCACTAC TCCCCGTGGT GGAACCTATC AGGTTGTCCT TCCTGATGGC
ACCAAAGTGT TTTTAAATGC AGACAGTAAG CTTGAATTCC CGGGTAAGTT TTTGGGCGGC
GAACGGCGGG TTAAACTGAC CGGTGAAGCT TATTTCGTGG TTGTGCATAA TTCAAAAATG
CCTTTTAAAG TGGAAAGCAC CGGGCAGACT GTAGAGGATA TTGGTACTGA ATTTAACATC
AATGCTTATG CGGACGAGCA TAGCACGAAA ACTACATTGG TTGAGGGCAG TGCAAAGGTA
AATGAGGTCA TACTCAAACC AAACCAGCAA TCCTCTCTTA ATGGTACCCG TATAAAAGTT
GAACATGTGG ACACAGAATT GTTTATAGCC TGGAAAAACA ATCAGTTTGT TTTTGAACAG
GATGACATCC GCTACATCAT GCGCATGATC TCGCGCTGGT ATAATGTAGA AATAGTATAT
CTGGGTGAAT TACCTGTAAC TACATTTAGT GGCTCGGTAT CCCGTTTTGC CAATGTGTCT
GAAGTATTGC GGCCATTAGA ATCAACCGGA CAGGTAAAAT TTAAAATTGA AGGAACGAAG
ATTTTGGTAA GCAGATAG
 
Protein sequence
MQKSNARIQV LLQNYFNNLN TETENEELWS HIITSHNDQE LMQLFPDAFS DEMEVPENAL 
DATKKQTILN YIYNHHLLQA SHQPKTLRLL PKLAAIAAAV ALIISGVWFY AGNPVANRNS
KIANQNDIKP GKNTATITLP GGSSVQLSDA KSGVVIDASK ITYSDGTTLE GDTSSPGLLN
GMTTITTPRG GTYQVVLPDG TKVFLNADSK LEFPGKFLGG ERRVKLTGEA YFVVVHNSKM
PFKVESTGQT VEDIGTEFNI NAYADEHSTK TTLVEGSAKV NEVILKPNQQ SSLNGTRIKV
EHVDTELFIA WKNNQFVFEQ DDIRYIMRMI SRWYNVEIVY LGELPVTTFS GSVSRFANVS
EVLRPLESTG QVKFKIEGTK ILVSR