| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3952 |
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| Symbol | |
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| ID | 8255086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4753073 |
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| End bp | 4754347 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937616 |
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| Product | nucleotide sugar dehydrogenase |
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| Protein accession | YP_003094205 |
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| Protein GI | 255533833 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.273153 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCAG CAAATAAGCC ACATATTGCA ATTATCGGAT TAGGCTATGT AGGGCTACCC
CTGGCCATTG AATTTGCCAA ACAGTACCAG GTATTGGGCT TTGATATTGA TGAAGAAAGA
ATAAAAGACC TTACTGCAAA CATAGACCGC ACCAAAGAGG CAGACCTGAA CGCACTACAA
AATGTACTTG GTAAAGGTCT TACCCTATCC TCCAATCAAT CCTTATTAGA AGACTGCAAT
GTTTACATCG TAACGGTACC TACCCCTATT GATCAGTTTA AGGCGCCCGA CTTAAAACCC
TTGCTTAGTG CTTCTAAAAT GCTGGCAAAG TACCTGTTAA AAGGAGATGT GGTCATTTAT
GAATCTACCG TTTACCCGGG CTGTACCGAA GAGGATTGCG TACCCATCCT GGAAAAACAC
TCCGGTTTAA AATACAATAG CGATTTTTAT TGCGGCTATT CCCCGGAAAG GATCAACCCT
GGCGACAAAG TAAACACGCT TACCAAAATC ATCAAGGTTA CTTCTGGTTC TACTCCCGAA
GTGGCCGACT GGATTGACGG ACTATACGCC AGCATCATTA CCGCAGGTAC CCACAAAGCC
CCAAGCATAA AAGTTGCTGA GGCCTCAAAA GCCATAGAAA ATGCCCAGCG GGATGTAAAT
ATCTCCTTTG TGAACGAACT GGCACTTATA TTCGATAAGC TGGATATTGA TACTGCAGAC
GTGATTGCAG CTGCAGGAAC AAAATGGAAT TTCCTGAAAT ATAAGCCTGG CCTGGTGGGT
GGGCACTGCA TTGGGGTCGA TCCCTATTAC CTGGCACATA AATCCAATGC ACTTGGTTAC
ACCCCTCAGG TCATCCTGTC GGGCAGAAGG GTGAACGAAA ACATGGGTAT TTTTGTGGCC
AGTAAGGTGG TTAAAATGAT GATTGCCAAA GGATCTGCTG TAAAAGGAGA AAAAGCCCTC
ATTCTGGGTT TCGCATTTAA AGAAAACTGT CCGGACATCA GGAACACCAG GGTTATCGAT
ATTTATACAG AGTTGCAGCA ATTTGGTATG GAAGTAGATG TTTATGATCC ATGGGCAAAT
GCAGATGAAG TAGCGCAGGA ATATAACATT ACATTAAGCC CAGACCTGGC AAACCAGGAA
TATAAAGCAA TCATCATTGC CGTTGCCCAT AATGAGTTTT TGAGCATCGA TTACCAGAAA
TACAAACAAG CGGGCGCAAT CATTTTTGAT ACCAAATCAT TTATCGACCG CAAGTTTGCA
GATGCAAGAT TGTAA
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| Protein sequence | MSAANKPHIA IIGLGYVGLP LAIEFAKQYQ VLGFDIDEER IKDLTANIDR TKEADLNALQ
NVLGKGLTLS SNQSLLEDCN VYIVTVPTPI DQFKAPDLKP LLSASKMLAK YLLKGDVVIY
ESTVYPGCTE EDCVPILEKH SGLKYNSDFY CGYSPERINP GDKVNTLTKI IKVTSGSTPE
VADWIDGLYA SIITAGTHKA PSIKVAEASK AIENAQRDVN ISFVNELALI FDKLDIDTAD
VIAAAGTKWN FLKYKPGLVG GHCIGVDPYY LAHKSNALGY TPQVILSGRR VNENMGIFVA
SKVVKMMIAK GSAVKGEKAL ILGFAFKENC PDIRNTRVID IYTELQQFGM EVDVYDPWAN
ADEVAQEYNI TLSPDLANQE YKAIIIAVAH NEFLSIDYQK YKQAGAIIFD TKSFIDRKFA
DARL
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