Gene Phep_3951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3951 
Symbol 
ID8255085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4752521 
End bp4752862 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content36% 
IMG OID644937615 
Producthelix-turn-helix domain protein 
Protein accessionYP_003094204 
Protein GI255533832 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.211982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAA TAAGTAAAAA CATCAAACGT TTCCGACAAA AAAAAGGATG GAGCCAAAGA 
GAGGTTGCCG AACAGTTAAA TATTTCCATT CCTGCTTTTT CTAAAATTGA GAATGGCATT
ACGGATATCA ATTTGAAAAG GCTAGGGCAA ATTGCGACCC TGCTGGAAGC ATCCATTATG
GATTTAATGG CTACCGATGG AGAAAACCCG CAATCAAAGC ACTCTATGCA TGTGAATATG
CTTAAAATCA AACTGGCTAA AAAAGAGGAA GAAGTAATTG ATCTTCAAAG AAGGGTTATT
GAACTTTATG AGGAAGTAAA AAAGAAAAAT AAAGGGAATT GA
 
Protein sequence
MNTISKNIKR FRQKKGWSQR EVAEQLNISI PAFSKIENGI TDINLKRLGQ IATLLEASIM 
DLMATDGENP QSKHSMHVNM LKIKLAKKEE EVIDLQRRVI ELYEEVKKKN KGN