| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3946 |
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| Symbol | |
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| ID | 8255080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4745566 |
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| End bp | 4746756 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644937610 |
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| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
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| Protein accession | YP_003094199 |
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| Protein GI | 255533827 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | [TIGR03588] UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0922826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.07545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATA ACGTGGTTAT TCCATATGGA AAGCAGAATA TTACTCAAGA AGATATTAAA
AAGGTTATTG AGGCTTTGCA ATCTGATTAC CTTACCCAAG GGCCAAGGAT TTTGCAGTTT
GAGCAGGAAT TTGCTAAGTA CATAGGCTGT GAATATGCAG TTGCAGTGAG CAATGGTACG
GCCGCTCTTC ACCTGTGTAC GTTGGCCTTA GGTGTAAAAG AAGGTGATAA AGTAATTACA
ACCCCTATTA CTTTTGCTGC ATCGGCAAAC TGTGTGCGCT ACTGTGGAGG GGAGGTCGTA
TTTTCCGATA TTGACTCCGA AACTTATCTG ATTGATATTG AGAAGATAAA ATCGCTGCTT
GACGCAAGCC CGAAAGGAAC TTACAAAGGA ATTATTCCTG TCGATTTTGC AGGTAGAGCA
GTCAATTTGG AGGAGCTTAA GAAATTAGCG AAGGAGTATG ATTTATGGAT TATTGAAGAT
GCCTGTCATG CTCCTGGTGG TTACTTTATT GATAAAAATG GGATTCAGCA AAATTGTGGA
AACGGTAATT TTGCTGATTT AGCTATTTTT TCATTTCATC CTGTAAAACA CATTGCTTGT
GGTGAAGGAG GTATGATTAC AACTAATAAT AGGGCGCTAT ACGAAAAATT ACTTGTTTTA
CGTTCACATG GCATTACAAA ACAGAGTGAT GTATTTACCA ATTCTATTGA ATTGGCCGGT
GGGAGGGAAG AATATCCAGG TTGGTATATG GAAATGCAAA CTTTAGGCTT CAATTACCGT
TTAACTGATT TTCAGGCTGC TTTAGGTTCC AGCCAATTAA AAAGAGCTGA TCAAGGGCTT
CTTAAAAGAA GGCAAATAGC CTCAAAATAC TATAATTCAT TTATTGAAAA AGAATATATT
CTAGGACAAT CAGGAGTAGT TGAAGGGCAT GCCTATCATT TATATATTAT TGAGGTTGAA
AACAGGTTGG GCCTTTATAA TTACTTAAAA GATCATAATA TTTACGCTCA AATACACTAT
ATCCCATGCC ATTTAATGCC TTACTATAAG GAAATTGGAT GGAAGGAAGG AGATATGTCA
AATTCAGAAC AATATTATAG GCACTGTATA AGTTTACCAA TGTTTCCATC TTTAAAAGAT
GAAGAACAAG ATTATGTGAT CGCAAAAATA TATGAGTTCT TTGAAAGTTA A
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| Protein sequence | MNNNVVIPYG KQNITQEDIK KVIEALQSDY LTQGPRILQF EQEFAKYIGC EYAVAVSNGT
AALHLCTLAL GVKEGDKVIT TPITFAASAN CVRYCGGEVV FSDIDSETYL IDIEKIKSLL
DASPKGTYKG IIPVDFAGRA VNLEELKKLA KEYDLWIIED ACHAPGGYFI DKNGIQQNCG
NGNFADLAIF SFHPVKHIAC GEGGMITTNN RALYEKLLVL RSHGITKQSD VFTNSIELAG
GREEYPGWYM EMQTLGFNYR LTDFQAALGS SQLKRADQGL LKRRQIASKY YNSFIEKEYI
LGQSGVVEGH AYHLYIIEVE NRLGLYNYLK DHNIYAQIHY IPCHLMPYYK EIGWKEGDMS
NSEQYYRHCI SLPMFPSLKD EEQDYVIAKI YEFFES
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