Gene Phep_3937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3937 
Symbol 
ID8255071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4737928 
End bp4738473 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content36% 
IMG OID644937601 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003094190 
Protein GI255533818 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0562278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATTA ATAAAAATAT ATTTATCCGA GGAAATCATA TTGATCTCAG GCTGCTCACT 
AAGGAGGATA TTTCTGGCAA TTATTCAAAT TGGCTGAACG ACCCCGAGAT TACTCATTAT
AACTCTCATG GGCGGTTCCC TGCCACAAAT GAAGATCTTG TAAATTATGT TGAACAGTCA
AGGATTTCAA GGAATGCATT GGTATTAGCA GTAGTTGACC AGGCTACACA AGCTCATATT
GGAAATGTAA GCCTTCAAAG TATAAATTGG ATTGACCGTA ATGCTGAAAT AGCATTTCTT
TTAGGCGAGA AAGCATATTG GGGGAAAGGT ATAATGCTTG AGGCCGGCGA AATGCTTATA
AACCATGGCT TTAAAATGTT AAATTTACAC AGGATTTATT GTGGTACTTC TTCAGAAAAT
GTTGGGATGC AAAGACTAGC TCTAAAATTA GGAATGATTG AAGAAGGGCT TAGAAAGGAC
GCACTCTATA AACAAGGTAA GTATGTAGAT GTTATTGAAT ATGGCATCTT ATCCAAAAAA
ATATGA
 
Protein sequence
MEINKNIFIR GNHIDLRLLT KEDISGNYSN WLNDPEITHY NSHGRFPATN EDLVNYVEQS 
RISRNALVLA VVDQATQAHI GNVSLQSINW IDRNAEIAFL LGEKAYWGKG IMLEAGEMLI
NHGFKMLNLH RIYCGTSSEN VGMQRLALKL GMIEEGLRKD ALYKQGKYVD VIEYGILSKK
I