| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3924 |
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| Symbol | |
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| ID | 8255058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4723261 |
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| End bp | 4724250 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644937588 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_003094177 |
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| Protein GI | 255533805 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.228757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0226045 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAA AAAGAGTTTT AATTACCGGT GCTGCCGGCT TTTTAGGTTC GCATTTATGC
GACAGATTTA TCAAAGAGGG TTATCATGTG ATCGCAATGG ACAACCTGAT TACGGGCGAC
CTGCAAAACA TACAGCATTT ATTCGGATTG GAAAATTTTG AGTTTGCACA TCACGATGTT
TCCAAATATG TATATGTATC TGGCGAGCTG GATTATATTC TTCATTTTGC TTCACCCGCC
AGCCCGATTG ATTATTTAAA AATTCCTATT CAAACCCTCA AAGTTGGCTC ATTGGGCACA
CACAACCTGC TTGGTTTGGC GAAAAATAAA AATGCAAGGA TGCTGATCGC TTCTACTTCA
GAAGTTTATG GTGACCCAAG TGTAAACCCT CAGCCTGAAG AATACTGGGG CAATGTAAAC
CCTGTTGGTC CAAGGGGTGT TTATGATGAA GCAAAACGTT TTCAGGAAGC CATGACCATG
GCTTACCATA CTTTTCATGG TTTGGAAACC CGCATTGTAA GGATATTTAA TACTTACGGA
CCAAGGATGC GGTTGAATGA CGGACGTGTT TTGCCTGCCT TTATTGGCCA GGCCCTGCGC
GGAGAAGACC TGACCGTATT TGGGGATGGC TCGCAGACCC GCTCATTTTG CTATGTGGAT
GACCTGATAG AAGGTATTTA CAGGCTATTG CTGAGTGATT ATGCCCTTCC GGTGAACATT
GGCAACCCGG ATGAGATCAC CATCAGGCAA TTTGGAGAAG AGATCATCAA ACTTACCGGT
ACAAGCCAGA AACTGGTATT GAAAGACCTG CCGGTAGACG ATCCTAAGCA AAGACGGCCT
GACATTACCA AGGCAAGAGC GATACTGGGT TGGGAACCGA AAGTAAGCCG TGCCGAAGGG
TTAAAAATTA CTTATGAGTA TTTTAAATCC CTGCCCCAGG AAGCTTTAAC AAACAAAGAA
CATAAAGATT TTTCTACTTT TAATCTATAA
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| Protein sequence | MKTKRVLITG AAGFLGSHLC DRFIKEGYHV IAMDNLITGD LQNIQHLFGL ENFEFAHHDV
SKYVYVSGEL DYILHFASPA SPIDYLKIPI QTLKVGSLGT HNLLGLAKNK NARMLIASTS
EVYGDPSVNP QPEEYWGNVN PVGPRGVYDE AKRFQEAMTM AYHTFHGLET RIVRIFNTYG
PRMRLNDGRV LPAFIGQALR GEDLTVFGDG SQTRSFCYVD DLIEGIYRLL LSDYALPVNI
GNPDEITIRQ FGEEIIKLTG TSQKLVLKDL PVDDPKQRRP DITKARAILG WEPKVSRAEG
LKITYEYFKS LPQEALTNKE HKDFSTFNL
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