Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3916 |
Symbol | |
ID | 8255050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4712051 |
End bp | 4714954 |
Gene Length | 2904 bp |
Protein Length | 967 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644937580 |
Product | hypothetical protein |
Protein accession | YP_003094169 |
Protein GI | 255533797 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0844847 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTTAA TGATCGGTAA ATTTAAATTA CTTTTTTTCA TCCTATTGGT GTGCTGTTTT AAAACAGAAG CCCAGACCTT TTATGTAAGT GCCCCTAAAA ATCCAGCGAA CATTATAACA GGAAGCGATA TTTATAAAGT TACATTAACA CCAAATGGAT TAGTATCGGA GTTAATATCT AACTGTTCGC CAAATGATCA GTTTTTTTCG ATCGCGATGA ATAAGAATGG TTTTTACTGG CTTAGAAGCC CATATTTCTA TAAAGGTGAT ATAAATGGAA ACGCTTTGAT AAATTGTCAA TTGTTAACCG GGGTAACTAC TGGCTCATCT GCACTTACTA TCGGTCCCGA CAACAAGGCT TATTATTCAT CAAATAGCTT GTACGCAACC GACCTGACCA CCTTACAAAC CGTCAGTTTA GGTCCAATGA GTTACTTTCC TACAGGAGAC ATGTGCTTCT TTAAAGGAAG TCTATATATG GCGGCAAGCC AGGGTATTAT CAAAGTGGAT ATAACTGATC CTACTAAAAG CTATGTATAT CTCCCACTTA GTCCAAACCT GAATATGTTT GGATTGGTGA GTGTCGCAAC GAGTCTCCGT AAAAATACGG TATATGGCTT ATGTAGCGTA ACCCCCTATC AAACTGATGT TCTTGAACTC GATCTGGAAA ACAAACGGAT CATAGGTGTT GTCGGATCCC TTCCTTATGG AATTCTGGAT GCAGCAAGCC CTGTAGAAGA CGGTAGTATA ACTGGAATAG AGCTGGATAA AATAGATATT AATCAGGATT GCAGTGCCCT AAACAAAGCT GTGGTTGAGA TTCTGACCAA ACCTCACCTT GAACAATTCA CTTATGTGTT GAATGGGATA AGCAATACCA CAGGTAGGTT TACAGGGATT GATCCTGGAA CTTATACACT AAGCATTACT TCTGCATCTG ATCAGTTTTC TAGTACAATT ACCGTGGGAA TCTATGACTT GCTGAAACCC GACTATAGCT GGCAGCGCAA AAATGAAATG TGTGGTATTG CAGGCGAAAT TACTTTTACT TCTCCTGAGC CCAATAGCAA TTACCAGGTT CGTTACAACA ATACCTCATA TCCGATAAAT CATACTTTCA GTGGTTTAAA CTCCGGCACT TCTTATCATT TTGAAATTAT TAATAAAAAT GGTTGTAAAG TTGATGAAGC AGATATTCCC GTGTTAAAAG ACGTATGCAA AATTGAACTC GACCAGATTC AGTTACAGCA ACAGTGCGAT GCTTTTCATA AAGGCGTAAT TAAGGTGCTG ACAAAACCAC ATACATACGC TTACACCTAT ACTCTAAATG GCTCAGTCAG TAATTCAACC GGTGTTTTTA GTAACCTAAG CCCGGGGCAA TATGCCGTGA AAATAACTTC TTCTGAGCAT GAACTGGAAG TCCTTTCAAT AGAAGTTCCC GACTATAAAC TCACGCAGCC AACTATTACT TATAATAAAA ATAATCCGTC ATGCAATCTA AAAGGGGATA TCAAGTTCGG TATCGCGACG AACAGTAATT TGTATCAGAT CCAATATCAA AATAATGTAT TGCCATTTGA TCATTTATTT ACAAACCTAT CTGCCGGTAT CCATCATTTT GTAGTATTAA GTCAATCAGG ATGTTTAATT GATGAATATG ATATAGAATT TGTTTACGAA CCTTGCGCTG TTGAAATTAC AGCTATCGAT GTATTTGCTG AATGCAATGT ACTGGGTAAG GCCGCTATAC GTGTTACCTG CCCGGCCATC CCTGAAACCT ATAATTATTC TCTTAGTAAC GGAATGACGA ATAGCACCGG GCGATTTAAT ATGGTAGACC CTGGGAATTA TACCTTAAAT GTGACAGCCT CCGGAGGTGG CACCCCTCAA ACGCGAGCCA TTATCGTTCC TGATTACAGA TTATTGCATC CATTGATTAC CTATAATAAA AATGATCCAT CGTGCAATTT AAAAGGGGGC ATCAAATTCA GCATAGCCGG AAACAGTAGC TTATATAAAA TAAAATACAA AACAGACATA CTACCATTTG ATCATTTATT TGATAACCTG TCTATGGGCA TACATCATTT TGTTATTCTA AATCAAGCTG GGTGTCTGAT TGATGAATAT GATGTTGAGT TGGTATATCA ACCCTGTGAT GTGGTGATTA ACGATGTGGA AGTATTTGCA GAGTGTGATG TACTTGGTAA GGGGGCAATC CGCGTAAGTT GTCCGACTAT TCCAGAGACT TACACTTACT CATTAAATAA TGGCATGAGC AATAACACCG GTATCTTCAA CATGCTAAAT CCGGGAAGTT ATATCTTAAA TGTTTCTGCA TCTGGAGGGG GAACGCCAAA AAGCCTTCCT GTTGTTATAC CCGATTATTC ATTAGATAGA CCACTGAGTG TGCTGAATAA AACAGAGCCT GTTTGTGATC TTCCAGGCCA GCTAAGTTTT ACGATAAAGA CAAATCCAGA GCTGTATGTC ATCAGGTATC ATTCTTTAAC CTATCCCGTT AATCATACCT TTACTAATTT GTATGCGGGC AGTCATCGTT TCTCTATACT CAAAAAAAAT GGTTGTATTG TAGATGACAT TAGTGTACAA TTAACCAGAG AGGAGTGTGG GGATGTAGGG TTTCCTAATG CCTTCAGTCC TAACTTAGAC GGCGTCAATG ACATCTTCAA AGCAAATAGC AATAGCAAGG CAACTAATTT TAAGATCCAG ATTTATGATA GAAGGGGGGT TTTAGTTGCA AGCTCGAACG AACTGCACAA TTGCTGGAAT GGAGATTACA AAGGTGAAGC ATTACCTACA GCAACCTATT TTTGGATTGC AACTTTTACA ACTCAGCGAA ATGAAGCCGT TGTTAAAAAA GGATCGGTTA CTTTAATAAG GTAA
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Protein sequence | MLLMIGKFKL LFFILLVCCF KTEAQTFYVS APKNPANIIT GSDIYKVTLT PNGLVSELIS NCSPNDQFFS IAMNKNGFYW LRSPYFYKGD INGNALINCQ LLTGVTTGSS ALTIGPDNKA YYSSNSLYAT DLTTLQTVSL GPMSYFPTGD MCFFKGSLYM AASQGIIKVD ITDPTKSYVY LPLSPNLNMF GLVSVATSLR KNTVYGLCSV TPYQTDVLEL DLENKRIIGV VGSLPYGILD AASPVEDGSI TGIELDKIDI NQDCSALNKA VVEILTKPHL EQFTYVLNGI SNTTGRFTGI DPGTYTLSIT SASDQFSSTI TVGIYDLLKP DYSWQRKNEM CGIAGEITFT SPEPNSNYQV RYNNTSYPIN HTFSGLNSGT SYHFEIINKN GCKVDEADIP VLKDVCKIEL DQIQLQQQCD AFHKGVIKVL TKPHTYAYTY TLNGSVSNST GVFSNLSPGQ YAVKITSSEH ELEVLSIEVP DYKLTQPTIT YNKNNPSCNL KGDIKFGIAT NSNLYQIQYQ NNVLPFDHLF TNLSAGIHHF VVLSQSGCLI DEYDIEFVYE PCAVEITAID VFAECNVLGK AAIRVTCPAI PETYNYSLSN GMTNSTGRFN MVDPGNYTLN VTASGGGTPQ TRAIIVPDYR LLHPLITYNK NDPSCNLKGG IKFSIAGNSS LYKIKYKTDI LPFDHLFDNL SMGIHHFVIL NQAGCLIDEY DVELVYQPCD VVINDVEVFA ECDVLGKGAI RVSCPTIPET YTYSLNNGMS NNTGIFNMLN PGSYILNVSA SGGGTPKSLP VVIPDYSLDR PLSVLNKTEP VCDLPGQLSF TIKTNPELYV IRYHSLTYPV NHTFTNLYAG SHRFSILKKN GCIVDDISVQ LTREECGDVG FPNAFSPNLD GVNDIFKANS NSKATNFKIQ IYDRRGVLVA SSNELHNCWN GDYKGEALPT ATYFWIATFT TQRNEAVVKK GSVTLIR
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