Gene Phep_3915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3915 
Symbol 
ID8255049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4711465 
End bp4712022 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content43% 
IMG OID644937579 
ProductHeme oxygenase 
Protein accessionYP_003094168 
Protein GI255533796 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3230] Heme oxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.238149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCCG ATAAAGTTAA AGCACAAACC AGCACTTACC ACAGGGAGCT TGAAGCCATC 
CTGGTACGGA AAATAAAATC TATCCGTTCG GTACAGGATT ACATACAGAT CTTAAATGAT
TTTTACAGTT TTTTTGCTGG GCTAGAACTG CTGATCAGCA AACATCTGCA GCCTACACTT
GCAGATGCAG GTGAGCGAAG GAAAACAGCC GCTATTGCAG ATGACCTTAG CTATTTTAAA
GCGAAAGTTC CTGATCTGGC GGCCGGAGCA GAGCTTCCTG TCATTTTAAA CCATTTTCAG
GCGCTGGGCG CATTGTATGT GATAGAAGGC TCTACGCTAG GTGGAAAATA CATCAGCCAG
ATGATATCGC AACAGCTGAA TATTCCTGTT GATGAGGGTT TATCTTTCTT TAACGGCTAC
GGAGAAAGTA CCATGGAGAT GTGGGCCAGG TTTAAAGATT ATTTGAATAA GGAAGCAATT
GCTGATGAAC AACAGGCAGA TGTAATTGAA GCTGCAAATC AGACGTTTTT GAAGTTTAAA
GATTGGGTTG AAGGGTAG
 
Protein sequence
MIADKVKAQT STYHRELEAI LVRKIKSIRS VQDYIQILND FYSFFAGLEL LISKHLQPTL 
ADAGERRKTA AIADDLSYFK AKVPDLAAGA ELPVILNHFQ ALGALYVIEG STLGGKYISQ
MISQQLNIPV DEGLSFFNGY GESTMEMWAR FKDYLNKEAI ADEQQADVIE AANQTFLKFK
DWVEG