| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3914 |
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| Symbol | |
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| ID | 8255048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4709731 |
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| End bp | 4711260 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644937578 |
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| Product | Phytochrome central region domain protein |
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| Protein accession | YP_003094167 |
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| Protein GI | 255533795 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.218618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAGA AAAAAAACTT TGATTCTGAA TTTTGCGGCA ATTTGCCGTT ACATAACGTG
AACCTGATAC AGGATTATGG TTACCTGCTG GTGCTTGAAC CAAAAGGCTT AAAGATCATC
CAGGCAAGTG AAAATACAGT TGAAATAACC GGCAGGCCGG TTCAGGAACT GGTAGGCACA
GCGCTTTCAC AATACCTGGA TGTGGAAAGT GCGGACAAAT TAAGTGATAA TTTGAAATCC
GGTATCAAAC AGAGGCTGCC CTTCAATCTA TCTATAAAAA ATGGACAGAA TGCTGAACAT
TTCCATGCTT TGATGCACAT TAAAGCAGAC TATATACTGA TTGAACTGGA AAAAGCCAGG
GATTTGGAAA GAAAGAGTTT TACGGATGTT TTCCAGGAAA TAAAAAAAAT AATGGCTGCC
ATTGAACAGG CAGATACCGT GCAGGCAGTT TGTGAACTGG CCGTTCACGA AATCCGTAAA
ATATCGGGCT TTGACGGGGT GTTGATGTAC CAGTTTGACC GCGACTGGAA TGGTACCGTT
ATAGCAGAGG AAAAAGATGA AAGGCTTGAA CCTTATATCG GGCAAACTTT TCCGGCATCT
GATGTGCCTA AACAAGCCCG GCAGCTTTAC CTGAAAAATC CTTACCGGCT GATCCCAAAC
CGGTCTTATC AGCCAGTTCG CCTATATCCG GTGATCAACC CGGTTACCAA CTCGTTCATA
GACTTGTCCG ACTGTAACCT GAGAAGCGTG GTAGCAGTGC ACCTGGAATA CATGAAGAAC
ATGAACATTG ACGCGTCCAT GTCTATCCGC GTGATCAGAA ATGCTGAGTT ATGGGGACTG
ATCTCCTGCC ATCACCTGAC CGAAAAATAC CTGGATTATG AGGTATGCTC TATTTTTGAA
TGGCTGTCGG CAGTGATTTC CAATGGTGTA TCACGTATAC TCGACAAAGA AGACTACGAT
TTTTCCAGCT CACTTCAGCA GATACGCAGT ACTTTGACAG ACCGGATTTA CGATGCCGAC
AATATCGTGG CTGGCTTGCT GCCTGAAGAG GGCCTGGGTT TACCTGACCT GTTTAATGCA
ACGGGGGCAG CCATGATTTT AAATGGAAGA ATGGTAACTC AGGGAATGGT ACCAGCGGAG
GAAGCCATAG ATAACCTGAT GATGTGGGTA GAAGGTAAAA GCATAAACAA GGTTTTTGCA
ACGGAACACC TGAGTGGTTT ATATGAGGAG GCCAGTGAAT TTGCTGATAT AGCAAGTGGT
GTGCTGGTCA TACCGATAGA CAACAATAAA GGAGATTACA TCCTTTGCTT CAGGCCTGAA
GTGGTAGAAA CGATTCAATG GGGGGGCGAC CCCAACCAGG CTATCAATTT TGAAAAGGAC
GGGAAAAGGT ATCATCCGAG GAACTCGTTT AAATTATGGA AACAAACCGT TAAACAACAT
GCCCTGCCCT GGAAACAGCA GGAACTGGAA GCCGCAGAGG CCTTGAGGAG TTTCTTGTTT
GAATTCAGGA CAAAACAGTT ATACAATTGA
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| Protein sequence | MAEKKNFDSE FCGNLPLHNV NLIQDYGYLL VLEPKGLKII QASENTVEIT GRPVQELVGT
ALSQYLDVES ADKLSDNLKS GIKQRLPFNL SIKNGQNAEH FHALMHIKAD YILIELEKAR
DLERKSFTDV FQEIKKIMAA IEQADTVQAV CELAVHEIRK ISGFDGVLMY QFDRDWNGTV
IAEEKDERLE PYIGQTFPAS DVPKQARQLY LKNPYRLIPN RSYQPVRLYP VINPVTNSFI
DLSDCNLRSV VAVHLEYMKN MNIDASMSIR VIRNAELWGL ISCHHLTEKY LDYEVCSIFE
WLSAVISNGV SRILDKEDYD FSSSLQQIRS TLTDRIYDAD NIVAGLLPEE GLGLPDLFNA
TGAAMILNGR MVTQGMVPAE EAIDNLMMWV EGKSINKVFA TEHLSGLYEE ASEFADIASG
VLVIPIDNNK GDYILCFRPE VVETIQWGGD PNQAINFEKD GKRYHPRNSF KLWKQTVKQH
ALPWKQQELE AAEALRSFLF EFRTKQLYN
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