Gene Phep_3909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3909 
Symbol 
ID8255043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4702772 
End bp4703326 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content49% 
IMG OID644937573 
Productputative colanic acid biosynthesis acetyltransferase WcaF 
Protein accessionYP_003094162 
Protein GI255533790 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.19089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAC AGACTGACCT TTCTACCTAT GTCCATGCGG CAGCGCATCG CAATTACAGC 
CCGCTGAAAA GGATACTCTG GTTTTATGTC AACACCTTGA TCTTTAAAAC AGGGCTGTTT
CCATCCAGCC GGCTCAAAGT TATGTTACTG CGTTGTTTTG GGGCCAAAGT TGGCAAAAAA
GTGGTCATCA GGCCTGGCGT AAACATCAAG CATCCCTGGC TGCTGAGTAT CGGAACACAT
GCCTGGATCG GTGAAAACGT TTGGATCGAC AACCTGGTAC AGGTATCCAT CGGCAACCAT
GTCTGTTTAT CCCAGGGTGC AACCCTACTT ACGGGCAGTC ACAATTACAA AGACCCGGCC
TTTGGCCTCA TTACCGGGGC AGTTACTTTA GAGGATGGGG TATGGATTGG TGCCAGAGCT
ACGGTTAACC ACAGCATAAC GGCCTCCTCA CATGCGGTAC TTACTGCCGG ATCCGTGGCC
ACAAAGAATT TAGAAGCCTG GTTTATTTAT CAGGGCAATC CTGCCAGCAA GACCAGGCCC
CGTTTTATCA GTTAA
 
Protein sequence
MNKQTDLSTY VHAAAHRNYS PLKRILWFYV NTLIFKTGLF PSSRLKVMLL RCFGAKVGKK 
VVIRPGVNIK HPWLLSIGTH AWIGENVWID NLVQVSIGNH VCLSQGATLL TGSHNYKDPA
FGLITGAVTL EDGVWIGARA TVNHSITASS HAVLTAGSVA TKNLEAWFIY QGNPASKTRP
RFIS