Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3909 |
Symbol | |
ID | 8255043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 4702772 |
End bp | 4703326 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644937573 |
Product | putative colanic acid biosynthesis acetyltransferase WcaF |
Protein accession | YP_003094162 |
Protein GI | 255533790 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.19089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAAAC AGACTGACCT TTCTACCTAT GTCCATGCGG CAGCGCATCG CAATTACAGC CCGCTGAAAA GGATACTCTG GTTTTATGTC AACACCTTGA TCTTTAAAAC AGGGCTGTTT CCATCCAGCC GGCTCAAAGT TATGTTACTG CGTTGTTTTG GGGCCAAAGT TGGCAAAAAA GTGGTCATCA GGCCTGGCGT AAACATCAAG CATCCCTGGC TGCTGAGTAT CGGAACACAT GCCTGGATCG GTGAAAACGT TTGGATCGAC AACCTGGTAC AGGTATCCAT CGGCAACCAT GTCTGTTTAT CCCAGGGTGC AACCCTACTT ACGGGCAGTC ACAATTACAA AGACCCGGCC TTTGGCCTCA TTACCGGGGC AGTTACTTTA GAGGATGGGG TATGGATTGG TGCCAGAGCT ACGGTTAACC ACAGCATAAC GGCCTCCTCA CATGCGGTAC TTACTGCCGG ATCCGTGGCC ACAAAGAATT TAGAAGCCTG GTTTATTTAT CAGGGCAATC CTGCCAGCAA GACCAGGCCC CGTTTTATCA GTTAA
|
Protein sequence | MNKQTDLSTY VHAAAHRNYS PLKRILWFYV NTLIFKTGLF PSSRLKVMLL RCFGAKVGKK VVIRPGVNIK HPWLLSIGTH AWIGENVWID NLVQVSIGNH VCLSQGATLL TGSHNYKDPA FGLITGAVTL EDGVWIGARA TVNHSITASS HAVLTAGSVA TKNLEAWFIY QGNPASKTRP RFIS
|
| |