Gene Phep_3900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3900 
Symbol 
ID8255034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4692419 
End bp4693690 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content40% 
IMG OID644937564 
Productacyltransferase 3 
Protein accessionYP_003094153 
Protein GI255533781 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAG ATTTTTTAAA CTGTCGTTTT GCACCAGCCG TAAAGGTTAA AGTGAAATTT 
GATCACCGGC TGGAAGGACT GCGCGGATTT GCTGCTCTGG GTGTTTTTCT GGCACATGGA
TTAGGGCAAA ACTGGCTCGA TCCCACTTAC AAGGCTGCTG GTATCATATC CTATCTGACA
GTGGGGGGAT TAGCCGTTTA CATTTTTTTT ATGCTATCCG GGTTTGTTAT TGGTTTAGGT
GCATTGAAGG AAACACACCT TAGCGTTCAC ACTTTCTATA AAAAAAGATT GGTTCGTTTA
TACCCGATTT ATTTATTTGC TTTTGCCTTT CTGTTCATTT TAGGCACTAA AAATACATTC
CCGATTATCG TGGGAAATTT ATTGATGCTT CAAAACAGCT TACCTTATCT AAACATTAAA
ATCCCGGTTG AATTTAATCT TGCCCCAATC TGGAGCATCA ATTATGAAAT GGTTTATTAT
CTGCTCTTTC CTTTGATAAG TTTAGCAAAG CCAAAAATTA TTAGCATTGC GATACCACTA
TTCCTCATTT CTGTAATCGG TTATTATTAT CCTTTTGTGC CCACATTCCT GACCGACTAT
GCTACCGGAT ATATCTTCTG GTTATTTGGA CTCGGGATTT GCTGGCTTTT ACCGGCAAGT
AAAGTAGTTA AGGTCAGTTT CCTGAGCTAC ATGTTTCTAA TTATGTCTTA TCAGCACTTT
GCAATAGGCT CCGTGTTTTT AAAAGGTTTT AATTTGTATA GCGAAAACAA ACATGGACTT
GGCCTGGAAA TCCTGTGGAA CCTTCCGCTC TGCATCCTGA TCATTTCAGA TCTTGCCGGA
AGGCAGCTGC CTTACCGGCG CTTCTTTTTG ATCCTGTCTT ACCTGATGCC ATTGTTTCTG
GTCATTTACC TGGTCATCAC AAAACGGCTG ACCGAGGATA CGCGCTGGAT CGCTTCCACT
TTATTTTATC TGATCTCTCT TGCTCTATTT GCAGAAAAAA CATGCTCAGC AATAGTTTTA
AAAGGGTTAA GTTTTATTGG CAGTATATCT TATGCCATCT ATATTTTCCA TTGGCCTTTA
ATGCTTATTG TGAATAAATA CTACCCCTAT TCGGGAACGA TGTCTGCTTA CCTGCAAAAG
TTTATAGTAT GGACGATACT TACTTTTACC TTATCATATT TTGCAGAAAA AATTATCCAA
GCCCGGATCA GTGCCTTTTT TTTCAAACCT GCTTCAGCTT CGCCCCGGCT TGTTAACAGC
AAGAACGGCT AA
 
Protein sequence
MNKDFLNCRF APAVKVKVKF DHRLEGLRGF AALGVFLAHG LGQNWLDPTY KAAGIISYLT 
VGGLAVYIFF MLSGFVIGLG ALKETHLSVH TFYKKRLVRL YPIYLFAFAF LFILGTKNTF
PIIVGNLLML QNSLPYLNIK IPVEFNLAPI WSINYEMVYY LLFPLISLAK PKIISIAIPL
FLISVIGYYY PFVPTFLTDY ATGYIFWLFG LGICWLLPAS KVVKVSFLSY MFLIMSYQHF
AIGSVFLKGF NLYSENKHGL GLEILWNLPL CILIISDLAG RQLPYRRFFL ILSYLMPLFL
VIYLVITKRL TEDTRWIAST LFYLISLALF AEKTCSAIVL KGLSFIGSIS YAIYIFHWPL
MLIVNKYYPY SGTMSAYLQK FIVWTILTFT LSYFAEKIIQ ARISAFFFKP ASASPRLVNS
KNG