| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3888 |
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| Symbol | |
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| ID | 8255022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4679701 |
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| End bp | 4680426 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644937552 |
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| Product | capsular polysaccharide biosynthesis protein |
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| Protein accession | YP_003094141 |
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| Protein GI | 255533769 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4464] Capsular polysaccharide biosynthesis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCAT TCTTTAAAAA AAATACGGGT ATACGTGATG TGGAATGGCT TGGTGTAGAT
ATGCATACAC ATTTATTGCC AGGGATTGAT GACGGAGCAA AAAACGTAGC AGATACTGTG
GGTTTAATTA AAGGCTTAAA GGAACTGGGC TTTAGCCAGT TCTTCTGTAC CCCGCATATT
TTTACAGAAT TGTACCCCAA TACGGCCGAA ACAATTGATG CAGCTTTAAC AATTACCACA
ACGGCATTAA CTAAAGCTGG TGTTCAGGTA AAAATTGATG CCGCAGCGGA ATATATGGTT
GATGAGACAT TTAAGCCTGC TACAAATTTA TTGAGTCTTC CCGGCCGGCA TGTTTTAATT
GAAATGTCTT ACCTATCTGA AATGCCAGCC ATTGAACAGG TTATTTTTGA TTTGCAGATC
ATGGGTCATA AAGTAATCCT GGCCCATCCG GAACGTTATG GTTATTACCA TAAAAAACCA
GACAGGTACC TTCGTTTAAA GGATATGGGA GTTTTGTTCC AGCTGAACTT ATTGTCCTTA
AGCGGATATT ATGGTAAAGA AATAAAGCAG GTTGCAGGAT ACCTGCTGCA GAAAAAATTT
TACGACTTTG CAGGAACAGA CCTGCACCAT CATCAACACC TGGATGAACT CAGACGCATG
GTTCGCAGCG GCAGCCTGCA CCAAACGATC GGAAATTATC CTTTTAAAAA TAAAGCCCTG
ATTTAA
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| Protein sequence | MFSFFKKNTG IRDVEWLGVD MHTHLLPGID DGAKNVADTV GLIKGLKELG FSQFFCTPHI
FTELYPNTAE TIDAALTITT TALTKAGVQV KIDAAAEYMV DETFKPATNL LSLPGRHVLI
EMSYLSEMPA IEQVIFDLQI MGHKVILAHP ERYGYYHKKP DRYLRLKDMG VLFQLNLLSL
SGYYGKEIKQ VAGYLLQKKF YDFAGTDLHH HQHLDELRRM VRSGSLHQTI GNYPFKNKAL
I
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