Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3885 |
Symbol | |
ID | 8255019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4672655 |
End bp | 4673803 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644937549 |
Product | rhamnose-proton symporter |
Protein accession | YP_003094138 |
Protein GI | 255533766 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGTAC ATGACGGAAG TCAACTGTCA TTCCTCTATT TTAGTCGGAC CAAATTTAAA ACCTTAAACA TGCAGATTCT ATTAGGAGTT ATTTTTCATT TTATCGGCGG CTTTGCTTCC GGCAGTTTCT ATATCCCTTT CAAAAAAGTT AAAGGCTGGG CCTGGGAAAC TTACTGGATT GTTGGTGGTC TGTTCTCCTG GTTAATCGTA CCTCCACTTG CAGCTTACCT CACCATCCCC GGTTTTATGG ACATCATTGT TCAAACCGAT GGCAAGATCT TATTGCTTAC TTACTTCTTT GGTCTGTTAT GGGGCATTGG GGGCCTTACA TATGGTTTGG GTGTCCGTTA TCTGGGCATA TCGCTGGGCA GTACCATTAT ACTTGGCCTG TGTTCGGTGT TTGGCGCCTT GATCCCTTCC TTGTATTATG ATTTTAACCC TACAGCTGGT AAGGACAGCT TATCAGATAT GGCTGCTTCC CAATGGGGGC AAATGGTATT GCTTGGTCTT TTGGTTTGCG TAGTGGGTAT TGTGGTATGC GGGCTGGCGG GCAGCATGAA AGAGAAGGAC CTGGTTGCTT CGGGCAAGGC CGATCCTTCA AATAAAGAAT ATAAACTGGG TATCGGTTTA ATCGTATCCA TTGTATCGGG TATTTTAAGT GCCTGTTTTG CCTTTGGTAT TGATGCCGGT AAAGACATGG CCCATCATGC CAATGAGGCC TGGAAAGCAC TGAATCCCGG ACAGGGTGAA TTCCTGTTCC AGAACAATGT AACCTATGTG GTAATCTTAT GGGGTGGTTT AACCACCAAC CTGTTCTGGT GTATGCTGCT CAATTCCCGC AATAAAACCT TTGGCGATTA TTCGGATAAA AAAGCCCCAC TGCTTAAAAA TTATATTTTC TCGGCACTGG CCGGAACCAC CTGGTTTTTG CAGTTCTTTT TTTATGGCAT GGGCGAAAGC AAGCTGGGTA ACGGTGCCAG TGGCTGGATC CTGCACATGG CCTGTATCAT TTTGGTGGCC AATGGCTGGG GCCTGTTCTT TAAAGAATGG TCGGGAGTAA AGAAAAAGAC TTTTGGAACC GTAGTTGCGG GCATTGTAAT CCTGATCTTA TCCATACTCA TTGTGGGTTA TGGCAATTCA ATTAAATAG
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Protein sequence | MTVHDGSQLS FLYFSRTKFK TLNMQILLGV IFHFIGGFAS GSFYIPFKKV KGWAWETYWI VGGLFSWLIV PPLAAYLTIP GFMDIIVQTD GKILLLTYFF GLLWGIGGLT YGLGVRYLGI SLGSTIILGL CSVFGALIPS LYYDFNPTAG KDSLSDMAAS QWGQMVLLGL LVCVVGIVVC GLAGSMKEKD LVASGKADPS NKEYKLGIGL IVSIVSGILS ACFAFGIDAG KDMAHHANEA WKALNPGQGE FLFQNNVTYV VILWGGLTTN LFWCMLLNSR NKTFGDYSDK KAPLLKNYIF SALAGTTWFL QFFFYGMGES KLGNGASGWI LHMACIILVA NGWGLFFKEW SGVKKKTFGT VVAGIVILIL SILIVGYGNS IK
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