| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3884 |
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| Symbol | |
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| ID | 8255018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4670505 |
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| End bp | 4672625 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644937548 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_003094137 |
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| Protein GI | 255533765 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3347] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02632] rhamnulose-1-phosphate aldolase/alcohol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACTC GAACAACCGA TTTTAAACAT GTAAGCTATT TGTGGGATGA TGCAAAGGCT
GCTGAAATGG CCGGGGATGA AGTAGCATTG TTGATCTACC GTTCAAATTT ACTGGGTGCA
GATTTGCGCT TAACCAATTA CGGTGGAGGT AACACCTCCT GCAAGGCCAT GGCCAAAGAC
CCGCTTACCG GAGAAGAAAA AGAGGTAATG TGGGTAAAAG GGTCTGGCGG CGATTTGGGT
ACCTTAAAGA AAAGCGGCCT GGCCGCTTTA TATGTTGACC GCCTGCGCAA CCTTAAAAAT
GTTTACCGGG GTTTGGCATA CGAAGATGAA ATGGTGGAAT TGTTTAACCA TTGCATTTAC
GATCTGGACA GTAAAGCGCC TTCTATTGAC ACCCCTTTAC ATGGCTTTTT GCCTTTTAAA
CATATTGATC ACCTGCATCC CGATGCAGCC ATCGCTATTG CAGCTGCAAA AGATGGCGAA
CGCATTACCA AAGAATTGTT TAACGGAACA ATTGGCTGGG TGCCATGGCA AAAACCTGGT
TTTGAGCTGG GGCTGATGCT TCGTAAATGC CTGGACGAAA ACCCTGGCAT CAGGGGCATT
ATGTTAGGTT CACATGGTTT ATTTACCTGG GGCGATACAG CTTACGAAAG CTATATGAAT
ACCCTTGAAG TAATTGAAAG GTGTGCTGCA TACCTGGATG AAAATTATGG TAAAAAAGGT
CCGGTATTTG GCGGACAGAA AATTGAAAGT GCCGAAAAAA CACAACGTGC AAAACAGGCC
GCAGCTATTG CCCCTGTTTT AAGGGGGTTC TGCTCGAGCG AAAGAAACAT GATCGGGCAC
TTTACCGATG ATGCCAGGGT ACTGGAATTT ATCAATTCAA ATGACCTGGA CCGTCTGGCC
CCTTTGGGTA CCAGCTGTCC TGACCATTTC CTGAGGACTA AGATCAGCCC TCTGGTATTG
AAACTGGATG CCAGTGAAGA CCTGAGTGAT GTGTCCTCTC TGAAAGAAAG GCTGGCCCCT
GAATTTGAGG CTTACCGTAA AATGTATACC GAATATTACA ATTCGTGCAA ACATGCCAAT
AGCCCGGCCA TACGTGATGC CAACCCGGTC ATCATTTTAT ATCCGGGCAT CGGGATGTTC
TCGTTTTCAA AAGATAAACA AACGGCAAGG GTGGCTGCAG AATTCTACAC CAACGCCATC
AATGTAATGA AAGGCGCCGA AGCCATTTCT GAATACACTT CTTTACCGAG ACAGGAAGCG
TTTAACATTG AATATTGGCT GCTGGAGGAA GCAAAGCTGC AGCGCATGCC TAAGCCGAAA
GCCTTGTCGG GAAAAATAGC CCTGATTACC GGAAGCGCAG GCGGGATTGG TAGAGCAATT
GCTAAAAAGT TTGTAGAAGA AGGTGCTGTA GTGGTACTGA ACGATATGAA CGCAGAACGC
CTGGAAGGTG CTGCTGAAGA GTTCAAAAAC AAATATGGTA AAGACAGTTA TGCCACTGCC
TTGCTGAATG TAACCAGTGC TGAAGACATT AACGCTGCAT TTGATGCTGC TGCGCTTGCT
TTTGGCGGGG TAGATATTAT TGTGAACAAT GCAGGCCTTT CTATTTCGAA AACCATAGCA
GACCATACCG AGAAGGATTG GGACCTGTTG TATGACGTAT TGGTAAAAGG CCAGTTTTTC
ATTACCCAGG CTGCTGCAGC GGTAATGAAA AAACAGGATA TCGGTGGTGA TATCCTGAAC
ATTGTAAGCA AAAACGCATT GGTAAGCGGG CCAAACAATG CGGGTTATGG CAGTGCCAAA
GCAGCTCAGC TGCACTTAAG CAGGTTAAAC GCTGCCGAAC TTGGTGCAGA TGGCATTCGT
GTAAACGTGG TTAACCCTGA TGCAGTGATC AGCGACAGCA ATATCTGGGC TGGTGGCTGG
GCCGAAGGCC GGGCAAAAGC TTACGGAATT ACCGTGGCAG AGTTGCCAGC TTACTATGCA
AAACGTACCT TGCTGAATGA AATAATTTTA CCGGACGATA TAGCCAATGC CTGCTTCGCT
TTTGTAGGCG GCCTGCTCAA TAAATCAACC GGAAATGTAT TAAATGTGGA TGGTGGTGTA
GCCAACGCCT TTGTCCGTTA A
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| Protein sequence | MSTRTTDFKH VSYLWDDAKA AEMAGDEVAL LIYRSNLLGA DLRLTNYGGG NTSCKAMAKD
PLTGEEKEVM WVKGSGGDLG TLKKSGLAAL YVDRLRNLKN VYRGLAYEDE MVELFNHCIY
DLDSKAPSID TPLHGFLPFK HIDHLHPDAA IAIAAAKDGE RITKELFNGT IGWVPWQKPG
FELGLMLRKC LDENPGIRGI MLGSHGLFTW GDTAYESYMN TLEVIERCAA YLDENYGKKG
PVFGGQKIES AEKTQRAKQA AAIAPVLRGF CSSERNMIGH FTDDARVLEF INSNDLDRLA
PLGTSCPDHF LRTKISPLVL KLDASEDLSD VSSLKERLAP EFEAYRKMYT EYYNSCKHAN
SPAIRDANPV IILYPGIGMF SFSKDKQTAR VAAEFYTNAI NVMKGAEAIS EYTSLPRQEA
FNIEYWLLEE AKLQRMPKPK ALSGKIALIT GSAGGIGRAI AKKFVEEGAV VVLNDMNAER
LEGAAEEFKN KYGKDSYATA LLNVTSAEDI NAAFDAAALA FGGVDIIVNN AGLSISKTIA
DHTEKDWDLL YDVLVKGQFF ITQAAAAVMK KQDIGGDILN IVSKNALVSG PNNAGYGSAK
AAQLHLSRLN AAELGADGIR VNVVNPDAVI SDSNIWAGGW AEGRAKAYGI TVAELPAYYA
KRTLLNEIIL PDDIANACFA FVGGLLNKST GNVLNVDGGV ANAFVR
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