Gene Phep_3882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3882 
Symbol 
ID8255016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4667812 
End bp4669215 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content45% 
IMG OID644937546 
Productcarbohydrate kinase FGGY 
Protein accessionYP_003094135 
Protein GI255533763 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1070] Sugar (pentulose and hexulose) kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTAA AGATGAAGGC AACTCCTGTA ATAGCTGTAT TTGATGTAGG GAAGACCAAT 
AAAAAACTGT TCCTCTTTGA TGAACATTAT AAAATTGTTT TCGAAAGATC GGCCAGGTTT
ACAGAAACAG TAGATGAAGA TGGTGACCCC TGCGAGAACC TGGAAAGCTT AAGGTTATCT
GTTTTTGACT CCTTACGGGA AGTATTCAGA AATCCGGCTT TTGAGGTAAA ATCAATCAAC
TTTGCTACTT ATGGGGCAAG CTTTGTCTAT ATCGATGAAA ATGGAAACCC ACTGGCCCCT
TTGTACAATT ACCTTAAGGA ATACCCGGAA AATTTAAAAG AACAGTTTTA CAATACTTAT
GGTGGTATGG CAGCGTTTTC CAATCGTACT GCCTCTCCGG TATTGGGCAG CTTAAATTCC
GGAATGCAGT TGTACCGGAT CAAATATGAA AAGCCTGAGC TGTTTAAGCA GATCAGGTAT
GCACTCCATT TGCCCCAGTA CCTGAGCTAC CTGATCTCGG GCGAGGCGTA TTCTGACCTG
ACCAGTATTG GTTGCCATAC CAATCTCTGG GATTTTACGA AAAACGATTA TCACGACTGG
GTACGTAAGG AAGGCATCAT CGATAAACTT GCACCCATTG TGCCCTCAGA CAGCGTGATC
CCGGCAGCGT TCCCTGGTAA CAATTACGCC GTTGGTGCCG GTTTTCACGA CAGTTCTGCT
GCCCTGGTCC CTTACCTGGT AAATTTCCAT GAACCCTTTG TGCTCCTCTC TACCGGAACC
TGGTGCATCA GCTTAAATCC TTTTAATGCT ATTCCGCTCA GTACAGAAGA ACTGGAGAAC
GACTGTCTCT GTTATTTACA ATACGAAGGA AAACCTGTAA AAGCATCCCG GCTGTTTGCA
GGGTATGAAC ATGAACAGCA GGTAAAAAGG ATTGCTGCCC ATTTTGGTAC AGATATCATT
GCCTACCGTT CTGTTACTTA CGATCCTAAA ATAGTTGAGG CCTTACAACA ATCAGATAAG
GCTACACCAT TTAGGGCAGA AGAGACCAAA GGCTTAAAGG AATCACCTTT CGCCCAGCGC
GACCTTAACG ATTATCCCTC AGATGTTGTG GCCTATCACC GCCTGATCCT GGACCTGGTG
AACCAGCAAT ATATTTCTAC AAGGAGGGTA CTGGATGGGA CCGCAGTGAA ACGCATATTT
GTGGATGGGG GCTTTAGTAA AAACGTCATC TTTATGAACT TACTGGCCGC TGTTTTTCCT
GATCTGGAAG TGTTTGCAGC CTATATGGCC CAGGCAACGG CAGTTGGTGC AGCACTGGCC
ATTCACCATT CATGGAATGC AAAAGCCTTA CCTAACGACA TCATTGAACT AAAATATTAC
GCCGGCGGGA AGGTTTTATC CTAA
 
Protein sequence
MGLKMKATPV IAVFDVGKTN KKLFLFDEHY KIVFERSARF TETVDEDGDP CENLESLRLS 
VFDSLREVFR NPAFEVKSIN FATYGASFVY IDENGNPLAP LYNYLKEYPE NLKEQFYNTY
GGMAAFSNRT ASPVLGSLNS GMQLYRIKYE KPELFKQIRY ALHLPQYLSY LISGEAYSDL
TSIGCHTNLW DFTKNDYHDW VRKEGIIDKL APIVPSDSVI PAAFPGNNYA VGAGFHDSSA
ALVPYLVNFH EPFVLLSTGT WCISLNPFNA IPLSTEELEN DCLCYLQYEG KPVKASRLFA
GYEHEQQVKR IAAHFGTDII AYRSVTYDPK IVEALQQSDK ATPFRAEETK GLKESPFAQR
DLNDYPSDVV AYHRLILDLV NQQYISTRRV LDGTAVKRIF VDGGFSKNVI FMNLLAAVFP
DLEVFAAYMA QATAVGAALA IHHSWNAKAL PNDIIELKYY AGGKVLS