| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3876 |
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| Symbol | |
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| ID | 8255010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4659063 |
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| End bp | 4660826 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937540 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003094129 |
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| Protein GI | 255533757 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAT ATTTATGCTT TATAAGCGGT CTGATCTTAT TTTCCTCTAT ACTTTCTTCC
TGTAAAAAGT ATCTGGAAAA ACCTGTGAGC AGCGATGTCA CACTGAATGA TGTTTTTGCA
TCACGCGACA AAACTGAGCA GTTTCTATGG ACAGTTTACA GAACTGCCTC TATTTATGAA
TTCCCTTATT ACTGGACTTC CGGTGAAAAT AATTACTACC ATTATGGTGC TACATATACC
ATTGTGGCTG CAGCTACCGA TGAGGCAGAT GCTTTTGCCA ATCTGACCGG GGCAGAAGCC
ATGAATAAGG GGAACTGGGG CCCAAATGAT ATAAAATTTT ATGAATTCAG GAGCGAGTAC
CCCTGGAAGG GTATCAGGAA TGCAAACATC TTTATAGAAA ATGTGGATAA AGCACCTTTT
TCGGATCAGG AAAAACGGGC AATGAAAGCA GAGGCCATAT TTTTACGTGC ACTGATGCAT
TTTGACCTGA TGCAGCGTTT GGGCGGAATC CCGATTGTTG ACAAAGTACT CAAGGTTTCT
TCAGCCGAAG ATGTTCCCGG CGTAAGAATT CCAAGAAGCA CTTATGAAGA AACGGTCAAC
TTTATTGTTA AAAGCTGTAA TGATATTGCC AATGATTTGC CTGTGAGCTA TTCCAGCAAT
TACAGGGGCC GGATCATCAG GGCCGCTGCC TATGCTTTAA AAGCAAGGGT ACTGTTGTAT
GCGGCCAGTC CGCTTTTCAA TTCCAACGAA ACTTATGTAC CTGTAAGCGA TCCGAAACTG
AGGGCGATGA TTGGCTATGC AGATGGCTAT AAGGCTGAGC GCTGGCAGCT GGCGGCCAAT
GCCAGTAAAA TGGTACTGGA TTCTGCCCAA AAGTGGGGCC TTGAACTTTA TAAAGGAAAA
ACAAATCCTA TAGACCGCTA TGAAGAGATC TTTATCAACC CGAATGTGAG CGAGATCATT
CTGGATGCAG GGATCCAGGG CTTGCAGACC AACAATTATT TTGTACGTTT TTTGACACCT
GGTACAATCG TTTATACGGG CTCTGATCCG GTTAATGTAG GCATCACCTT TAATTTTGCC
AAATTCTATC AAAAGGCTGA TGGAACAGAT CAAACCTGGA ATGAGGTTCC GGGAACAGCT
TATCCTTATG CACAGTATCA GCAAAAACTG GGTGAACTTG ATCCGCGTTT TCAGGCTTCT
GTATTCCAGT CAGGCACAGA ATGGTCCAGG GGCTCAGGTA CCAGATATCA TTTTTATGAA
CAGGGTTCCA AGCAGCTGGA CAGGTATAAT GGCGTTGGGT TCTTAAGAAA ATTCGTAAAG
GGGGTTTCGA ATGGTTCTGC CGCTCCAAGA TGGATTACTT TCCGGCTGGC GGAGTTTTAT
CTGAACTATG CTGAAGCGCT TAACGAAGTG AATGGTTCTT CAACAGAAAT CACAAATGCT
TTAAATGAAA TCAGGGCCAG GGTAAATATG CCTGGGATCA GTTATACCAG CCAGGATGAC
ATGCGTCAGA AAATCCGCCG GGAAAGAGGA GTAGAGCTTG CTTTTGAAGA GCACCGGTAT
TTTGATGTCC GCCGCTGGAA AATTGCAGGA CAGGAAGGGG TAATGAAGGG TGGAATGTGG
AGCCTTAAAT TGTATGGAGG GACTTCCCCA ACCTATAAAC TGGAAAAGTT TGAAGACCGG
GTATGGGAAG ATAAGATGTA TTTATATCCT TTTAACAGCA CAGAAATAGA TTTGGGCTAT
TTAATTCAAA ACCCGGGATG GTAG
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| Protein sequence | MKRYLCFISG LILFSSILSS CKKYLEKPVS SDVTLNDVFA SRDKTEQFLW TVYRTASIYE
FPYYWTSGEN NYYHYGATYT IVAAATDEAD AFANLTGAEA MNKGNWGPND IKFYEFRSEY
PWKGIRNANI FIENVDKAPF SDQEKRAMKA EAIFLRALMH FDLMQRLGGI PIVDKVLKVS
SAEDVPGVRI PRSTYEETVN FIVKSCNDIA NDLPVSYSSN YRGRIIRAAA YALKARVLLY
AASPLFNSNE TYVPVSDPKL RAMIGYADGY KAERWQLAAN ASKMVLDSAQ KWGLELYKGK
TNPIDRYEEI FINPNVSEII LDAGIQGLQT NNYFVRFLTP GTIVYTGSDP VNVGITFNFA
KFYQKADGTD QTWNEVPGTA YPYAQYQQKL GELDPRFQAS VFQSGTEWSR GSGTRYHFYE
QGSKQLDRYN GVGFLRKFVK GVSNGSAAPR WITFRLAEFY LNYAEALNEV NGSSTEITNA
LNEIRARVNM PGISYTSQDD MRQKIRRERG VELAFEEHRY FDVRRWKIAG QEGVMKGGMW
SLKLYGGTSP TYKLEKFEDR VWEDKMYLYP FNSTEIDLGY LIQNPGW
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