Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3872 |
Symbol | |
ID | 8255006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4651245 |
End bp | 4652861 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644937536 |
Product | hypothetical protein |
Protein accession | YP_003094125 |
Protein GI | 255533753 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5520] O-Glycosyl hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.875392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATATA TGCGTGCTTC TTTGCCATCC TTTGTGCTCA TCATTTTGAT GTCCGTATTT AATCCTTTAG TCTTTGCCCA GAAGAAAATA ATAAAAAATC CTGGTCCTGG TGCTCCTCAA AGCATCAGGA TCAGTTTAAC TGAAGAAAAG CAGACCATTC ACAGTTTTGG GGCCTCCGAT TGCTGGTCGG CAAAATATGT GGGCAAGTGG TCCGATCTGC AGAAAAAGAA CCGTATTGCT GATCTTTTAT TCAGTACAGA TACGACTTCA GATGGCAAGC CGAAAGGTAT AGGCCTGTCT TTATGGCGGT TTAACATTGG ATCGGGTAGT TACGAACAAG GTGCGGAAAG TAATATTCCT GATGAATGGC GCAGGGAAGA ATGCTTTTTA AATGAAAACG GTACTTATAA CTGGGAAAAA CAGAACGGGC AGCAATGGTT TCTGAAAGCG GCTAAACAAC GGGGGGTAGC TTATACTCTG GGTTTCTCGC TTACTCCTCC TGCTTTTATG AGCGGGAATG GGAAGGCCTA TAACAACAGC AATACACCGA ACCTGAATAT AAAGGCCGGT ATGACAAATG CTTATGCAGC ATTCATGTCT GCGGTTTCTG CTCATTTTAA ATTTGACTTT TTAAGCCCCG TAAATGAACC GCAGTGGTTC TGGGGAAGGG ACAGGATCAG TCAGGAAGGT TCACAGGCAA CGAATGCAGA AATAGCAGAC CTGGTAAAGG TGCTTTCTGT TCAACTTCCT TCAAAGAGTC CAGGAACGCA GGTGGTTATT GGGGAAGCCG GGCAATGGGA TTTTCTTTAT GGAAAGAATA CAGATGGCCG GGGTGATCAG ATCAGTGAGT TCTTTTCGCC CGCTTCTGCT CATTATATTG CTGATCGTCC AAATGTTAAG CGTATTATTT CCGGACACAG TTATTTTACA ACATGTCCGG ATAACAACCT GATCCATGTG CGTGAGCAGG TTGCTGCAAA GGCCAAACAA ACAGACCCCT TGCTGGAAGT ATGGCAAACG GAATTCGGCA TACTTGGCAA CATCTGCAAC CAATACAATG GCGGCCCGCG AAATACCGGG ATCGATTATG GGCTGTATGT AGCCAAGGTG ATCCATCACG ACCTTACCAT TGCCAATGTT ACTTCCTGGC AATGGTGGCT GTCCATCAGT CCTTATAATT ACAGTGATGC CCTCGTGTAT ATCAATGACC CTTCGGGGAT GATCAATGCC GCAGGATGTA AAAATGATGG TGAGGTATTA GAGTCCAAAC AACTATGGGC GATGGGAAAT TATTCCCGTT TTATCCGTCC GGGAATGAAG CGTATCGGGG TAAAGACAGA TGGTATTGCC GGTCCGGTTG AAGGGGCAGC TTCTCTCATG GTTTCTGCTT ATAAAGATGA AACCGCAAAA AAAATAGTAG TTGTAATTGT TAATCCGGAG CAAAAGGAAA AAGAATTTCA GCTTAGGGCC GCAGGTACTG TCTTTAAACT GGCAGGGAAC CTGCTGAACG TATACACTAC TGATGCACAA AATAACCTTA AAAAAACAAC TGCTTCGGCA GAGAAAGTAA AGATCGTTCC CCGGTCGGTA GTTACACTTG TTGGCACTTA CCATTGA
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Protein sequence | MEYMRASLPS FVLIILMSVF NPLVFAQKKI IKNPGPGAPQ SIRISLTEEK QTIHSFGASD CWSAKYVGKW SDLQKKNRIA DLLFSTDTTS DGKPKGIGLS LWRFNIGSGS YEQGAESNIP DEWRREECFL NENGTYNWEK QNGQQWFLKA AKQRGVAYTL GFSLTPPAFM SGNGKAYNNS NTPNLNIKAG MTNAYAAFMS AVSAHFKFDF LSPVNEPQWF WGRDRISQEG SQATNAEIAD LVKVLSVQLP SKSPGTQVVI GEAGQWDFLY GKNTDGRGDQ ISEFFSPASA HYIADRPNVK RIISGHSYFT TCPDNNLIHV REQVAAKAKQ TDPLLEVWQT EFGILGNICN QYNGGPRNTG IDYGLYVAKV IHHDLTIANV TSWQWWLSIS PYNYSDALVY INDPSGMINA AGCKNDGEVL ESKQLWAMGN YSRFIRPGMK RIGVKTDGIA GPVEGAASLM VSAYKDETAK KIVVVIVNPE QKEKEFQLRA AGTVFKLAGN LLNVYTTDAQ NNLKKTTASA EKVKIVPRSV VTLVGTYH
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