| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3871 |
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| Symbol | |
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| ID | 8255005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4648446 |
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| End bp | 4651220 |
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| Gene Length | 2775 bp |
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| Protein Length | 924 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644937535 |
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| Product | glycoside hydrolase family 2 sugar binding |
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| Protein accession | YP_003094124 |
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| Protein GI | 255533752 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAT TTAAATCCCT GTTGTTTTTT TTACTGATAA CTTTTTTATT TAGTCCAATA
CTCCGTGCCC AGCAGCAGGG AATAAGTGAA AATGTGCTTC CTATAGAGGG CATCTGGCAT
TTTAAGCTGG ACCCCTTTGA AACAGGTATC AATAGCAATG GTGTTCAGCT GCTCCCATCA
CTTGCAGAGA CCATTACCTT GCCAGGTTCT ACAGACCAGG CAGGCAAAGG GTATCAGACA
CAGGCAATGA CTTCGATCAG GCTGACAAGG CCATTTGAAT ACAAGGGGAT AGCCTGGTAT
GAGAAAGAGA TTTTTGTGCC ACTGGAATGG AAGGACAAGG AGATCCAACT CTACTTAGAG
CGTGCGCATT GGGAAACCAG GGTATGGATT AACGATAAAC CCATCGGAAA AAGGGAAAGC
CTTTCGGTGC CCCATATTTA TTCCATCACT GCGCTTGTTC GGCCCGGAAA GAAGAATAAG
ATCCGGATAA GGGTAAACAA TGAAAAGATA TATGATCTGG AATATGCCCA TGCCATTAGT
GCGGAAACCC AAACAAACTG GAATGGGATT ATCGGGAAAA TGCAGTTGCA GGCTAATGAT
AAGATTTATC TTGCCGATGT ACAGATTTAT CCCCATGCAG AAAAGAAAAC GGCTACAGCC
AAAGTACTGA TCAGCAATGC GGCAAAGAAA CAAGTAGAAG GCGAACTTTT TTTTGTCTGC
AGCCTTAAAA AAGCAGGTGC CGAACCTATG CCTGTACACC GTATAAAATT TTCCGGTCAG
GATTCGGTCA TTGCCCTTAC AACGGAAATT CCATTGGGAG AGCAGATCCA ATTGTGGGAT
GAGTTTGATC CTAATTTATA CCAGTTGAAT GTAAGCTTAA ATGCCGGGGC AGAGGGGCAG
TTAAGCAGGG CTGCTAAAAC GCTTGATTTT GGTATAAGGA CATTGGCTAC CCGGGAAACA
CAATTCTTAT TCAATGGTAT TCCCACCTTT ATCAGGGGAA CGGTAAACTC TTCGGAGTTT
CCATTGACGG GCTATCCGCC TACCAGGCTG AAAGAATGGC TCCGCATTTT TAAGACCTGC
AAGGATTATG GATTAAATGC CATGCGCTTT CATAGCTGGT GTCCGCCCGA AGCAGCCTTT
GAAGCCGCAG ATCAGTTGGG TTTTTACCTG CAGGTAGAAA ATCCGGACTG GAGGTTTACT
GTAGGGAAAG ATGCGGCCGT GAACCGGTTC TTAAAAGAAG AAGCCGACAG GATATTGCAA
GCCTATGGCA ACCATCCTTC ATTTATTATG TTTTGTGAAG GAAATGAAAT GGTTGGGCCG
GCGGTAAAGG AGTTTCTGAC GGAACAGGTT AAACACTGGA AAGAGACCGA TCCAAGGCAT
TTATATACAG GGAGTGCGGC TTATCCCTTG ATTGCAGAAA ACCAGTTTCA TGTATTGTAT
GGGGCAAGAC CACACCGCTG GAAAGAAGGC CTGAAAAGCC GGTTTAATGT ACGTCCACTG
GATACAGAGT ATGATTATGG GGAGTATGTG AAGAAAAATA AGGAACCGAT GATTACCCAT
GAGATCGGCC AATGGTGTGC GTTCCCTGAT TTTGGTGAAA TTTCTAAGTA TACCGGGGTC
TTAAAACCCT ATAATTATGA ATTGTTCAGG GAGCTGTTGA GGGACCATCA GCTGATGGAT
CAGGCAGGGG ATTTTACCAG GGCTTCGGGG AAATTTCAGG TGATCATGAA AAAGGAGGAA
GTGGAATCTT ATTTACGTAC TCCGGGTTTT GGGGGCTATC ACATGCTCCA GTTAAATGAT
TTTCCGGGAC AGGGGACTGC CCCTGTGGGT GTGGTTGATA TTTTCTGGGA TCCGAAACCT
TATGTGACTG CCAAAGAATT TAGCAGGTTT CAGTCGGCCC GGGTGCCCTT GCTCAGAACG
GCCTCTTTTA CCTGGACGAA TGACCAGACT TTTAAGGCCA GGGCACAGTT TGCCAACTTT
GGGAAGTTAA GTATGGAAAA TGCGGCAGTA AGCTGGTCAT TAAAATATCC GGATGGGGGC
TTATATGCCG GAGGGCAATT TAACCGCTGC AATATTCCTG TAGGTAGTCC TTTTGAACTG
GGTGAGCTAT CTGTTCCATT GGATCGGGTA ACAGCGGCGA CGAAACTGGT GCTGACGATT
AGCGTGGATG GAACCACATA CAGCAACCAT TGGAACATAT GGGTATATCC TAAAACATTG
CCTTCACCTG AAAGGAAAGG GCTGATGGTT GCTGATCATT GGGATAGCAA AGTGAAGCAA
TACCTTGAAA AAGGGGGAAA GGTGCTTTTG CTGGCCGATA CCTCAAAAAT ACTTTCGGAT
GCCGATCCGG CATTTTCCGG GATTTCATGG AATACGGTAT GGTCTGGCAT GCCGCCAAAC
CTGCTGGGCA TTTTGTGTAA CCCGGAGCAT CCGGCACTGA AATACTTCCC TACAGCAGAA
CACTCTGACT GGCAGTGGTG GGATATTGTA CGCAATTCAA AGCCTATGGT ACTTGAACAG
ATGCCTTTTT CATTTAAGCC ACTGGTACAG ATGATCCCCG ACTGGAACAA TCCACGTAAG
ATAGCCCTGG TGTTTGAAGT TAAAATAGGA AAGGGGAGCC TGCTGGTATC GGCAGTAGAT
CTGAAAAACA ACCTGGACAA ACGCCCGGTG GCCCGGCAAC TTTTGTATAG CCTGAAGGCA
TACATGAACA GTGATAAATT TTTACCTTTA ACCGAAGTGC CAGCCCAGAT GATCGATATG
ATCTTTAAAA AATAA
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| Protein sequence | MMKFKSLLFF LLITFLFSPI LRAQQQGISE NVLPIEGIWH FKLDPFETGI NSNGVQLLPS
LAETITLPGS TDQAGKGYQT QAMTSIRLTR PFEYKGIAWY EKEIFVPLEW KDKEIQLYLE
RAHWETRVWI NDKPIGKRES LSVPHIYSIT ALVRPGKKNK IRIRVNNEKI YDLEYAHAIS
AETQTNWNGI IGKMQLQAND KIYLADVQIY PHAEKKTATA KVLISNAAKK QVEGELFFVC
SLKKAGAEPM PVHRIKFSGQ DSVIALTTEI PLGEQIQLWD EFDPNLYQLN VSLNAGAEGQ
LSRAAKTLDF GIRTLATRET QFLFNGIPTF IRGTVNSSEF PLTGYPPTRL KEWLRIFKTC
KDYGLNAMRF HSWCPPEAAF EAADQLGFYL QVENPDWRFT VGKDAAVNRF LKEEADRILQ
AYGNHPSFIM FCEGNEMVGP AVKEFLTEQV KHWKETDPRH LYTGSAAYPL IAENQFHVLY
GARPHRWKEG LKSRFNVRPL DTEYDYGEYV KKNKEPMITH EIGQWCAFPD FGEISKYTGV
LKPYNYELFR ELLRDHQLMD QAGDFTRASG KFQVIMKKEE VESYLRTPGF GGYHMLQLND
FPGQGTAPVG VVDIFWDPKP YVTAKEFSRF QSARVPLLRT ASFTWTNDQT FKARAQFANF
GKLSMENAAV SWSLKYPDGG LYAGGQFNRC NIPVGSPFEL GELSVPLDRV TAATKLVLTI
SVDGTTYSNH WNIWVYPKTL PSPERKGLMV ADHWDSKVKQ YLEKGGKVLL LADTSKILSD
ADPAFSGISW NTVWSGMPPN LLGILCNPEH PALKYFPTAE HSDWQWWDIV RNSKPMVLEQ
MPFSFKPLVQ MIPDWNNPRK IALVFEVKIG KGSLLVSAVD LKNNLDKRPV ARQLLYSLKA
YMNSDKFLPL TEVPAQMIDM IFKK
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