| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3869 |
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| Symbol | |
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| ID | 8255003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4646797 |
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| End bp | 4647693 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644937533 |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003094122 |
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| Protein GI | 255533750 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.604271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAATC TTATGAATGT AAGAAAAATC AAGGAGGGCT TCCTCGGGCA GCAGATGATC
GTGCTTCCGC CTGATACCAA GAAAGTGGTT ACAAAAAATC CACTTATCCG TGGATTGTAC
CTTACCGCTA TCGGGTATTA TCCAAAGGCA ATCCATCACG ACCGCGAACG GAAGACAGGT
AGTCAGCAGT ATATATTTTT ATATTGTACA GAAGGCAGGG GTTATGTCGA GATTTTGAAA
CAACGGTTTG AGCTGGTGCC AAATACTTAC ATTATCATTC CCAAAAATAT TGCCCATCAT
TATTGCACCA GTGAATCCGA CCCCTGGACA ATTTATTGGA TCCATTTTAC GGGGGAACAT
GCAGATCAGC TTTATTCCAG GTACGCAAAA GATACAGCAC CAGAAGTACA GACCATAGCT
TATGATGAAC AAAGGACTGA ACAGTTTAAC CTGATGCTTT CCCTTCTTGA AAATAATTAC
AGCACAAGAA ACATAGAATT AACGAATATA AAGTTGCTCC AGTTCTTATC TTCTTTTATT
TACCACGAAG AAATGTATCC TTCTCATTAT TCTGTAGATC AGGTTAGCAT TTCTATAAAA
TTCATGAAAG AAAACCTGAC AAAATGTTAT GCGATACAGG AACTCGCTGC ACATTCCAAT
TATTCGGTTT CCCATTATTC CGATCTGTTC AAGAAAAAGA CAGGCTGTTC TCCTATGCAG
TATTTTAACC AGCTGAAGAT CCAGAAATCC TGTCAGTACC TGTATTTCAC CGATATGAAC
ATCAAAGAGA TCTGTGTAAA GATCGGTTTT GACGATCCCT ATTATTTTTC CAGGATGTTC
AAAAAACTGA TGGGCTCTTC TCCGGCCAAT TACAGGAATA TTTATAAAAA GAAATAG
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| Protein sequence | MDNLMNVRKI KEGFLGQQMI VLPPDTKKVV TKNPLIRGLY LTAIGYYPKA IHHDRERKTG
SQQYIFLYCT EGRGYVEILK QRFELVPNTY IIIPKNIAHH YCTSESDPWT IYWIHFTGEH
ADQLYSRYAK DTAPEVQTIA YDEQRTEQFN LMLSLLENNY STRNIELTNI KLLQFLSSFI
YHEEMYPSHY SVDQVSISIK FMKENLTKCY AIQELAAHSN YSVSHYSDLF KKKTGCSPMQ
YFNQLKIQKS CQYLYFTDMN IKEICVKIGF DDPYYFSRMF KKLMGSSPAN YRNIYKKK
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