Gene Phep_3862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3862 
Symbol 
ID8254996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4634091 
End bp4634645 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content42% 
IMG OID644937526 
Product5 nucleotidase deoxy cytosolic type C 
Protein accessionYP_003094115 
Protein GI255533743 
COG category[S] Function unknown 
COG ID[COG4502] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.490075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAA AAACGATTGG TATAGATATG GACGGGGTTT TAGCGGATAT TGAAGCTCAC 
TGGTTAAACT GGTATGAAAG GGATTATGGT GTAAGGCTTG GACCAGAGAT CTTTCTGGGT
GTAAAGGAGT CAGAAGCATT TCCAGACAAA GAAGCGGTAC TTAAATTTGT TTATTCACCG
GGTTTCTTCA GGACTTTACC GGTGATGGAA GGAGCAGTAG CAGCCGTAAA AAAACTTTCA
GAAGATTTTG AGATCTACAT CGTTTCTGCT GCAATGGAAT TCCCTTTGTC CTTATTTGAA
AAAAGGGAGT GGCTTGCAGA GCATTTCCCT TTCATCAGCT GGAAAAACAT CATTTTTTGT
GGCGACAAAA GTATAATTGA CACAGATTAC CTCATTGATG ACCATTGCAA AAATCTGGAT
CATTGTAAAG GCAGCCCTAT TATGTTTACT GCCGGCCACA ATACAAACCA TACACACCAT
ACCAGGGCGA ACAACTGGCA GGAAGTGCTG ACATTAATGG AAGCGGACAG GTGTGGAACT
GCCATCTGCA GGTAG
 
Protein sequence
MKRKTIGIDM DGVLADIEAH WLNWYERDYG VRLGPEIFLG VKESEAFPDK EAVLKFVYSP 
GFFRTLPVME GAVAAVKKLS EDFEIYIVSA AMEFPLSLFE KREWLAEHFP FISWKNIIFC
GDKSIIDTDY LIDDHCKNLD HCKGSPIMFT AGHNTNHTHH TRANNWQEVL TLMEADRCGT
AICR