Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3847 |
Symbol | |
ID | 8254981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4617311 |
End bp | 4617670 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644937511 |
Product | helix-turn-helix HxlR type |
Protein accession | YP_003094100 |
Protein GI | 255533728 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.803353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAA TTAAAGAAAG TTCAACGCGT AATTTTAACA AGCAGTTTTC TGCTATTTCT TGTCCCGTTA CTTACGTAAT GAACAAGATT GGCGGGTACT GGAAGCCGAT TATTTTGTAT CACCTTTCCA ACGGCCCGAA GCGTTACAGC GAATTAAAGC GGGCCATCCC CCAAATCACA GAAAAGATGC TAATCCAGCA TTTGAAGCAG TTGCAGGAAG ATAATCTGGT ACTAAGAACT GCGGAACCTG TTGTTCCTCC GTTTGTTACC TATTCATTAA CCCCTGCAGG AGCGAAGTTA CAACCTGTGC TGAATGCAAT GGCAGTATGG GGATTAGATG ATATGGAACA GAGAAGGTGA
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Protein sequence | MTAIKESSTR NFNKQFSAIS CPVTYVMNKI GGYWKPIILY HLSNGPKRYS ELKRAIPQIT EKMLIQHLKQ LQEDNLVLRT AEPVVPPFVT YSLTPAGAKL QPVLNAMAVW GLDDMEQRR
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