Gene Phep_3847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3847 
Symbol 
ID8254981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4617311 
End bp4617670 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content44% 
IMG OID644937511 
Producthelix-turn-helix HxlR type 
Protein accessionYP_003094100 
Protein GI255533728 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.803353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAA TTAAAGAAAG TTCAACGCGT AATTTTAACA AGCAGTTTTC TGCTATTTCT 
TGTCCCGTTA CTTACGTAAT GAACAAGATT GGCGGGTACT GGAAGCCGAT TATTTTGTAT
CACCTTTCCA ACGGCCCGAA GCGTTACAGC GAATTAAAGC GGGCCATCCC CCAAATCACA
GAAAAGATGC TAATCCAGCA TTTGAAGCAG TTGCAGGAAG ATAATCTGGT ACTAAGAACT
GCGGAACCTG TTGTTCCTCC GTTTGTTACC TATTCATTAA CCCCTGCAGG AGCGAAGTTA
CAACCTGTGC TGAATGCAAT GGCAGTATGG GGATTAGATG ATATGGAACA GAGAAGGTGA
 
Protein sequence
MTAIKESSTR NFNKQFSAIS CPVTYVMNKI GGYWKPIILY HLSNGPKRYS ELKRAIPQIT 
EKMLIQHLKQ LQEDNLVLRT AEPVVPPFVT YSLTPAGAKL QPVLNAMAVW GLDDMEQRR