| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3842 |
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| Symbol | |
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| ID | 8254976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4612619 |
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| End bp | 4614118 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644937506 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_003094095 |
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| Protein GI | 255533723 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.289536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGTAT TAAAAAAGTT TTTGGGACAA ACGGCCGTAT ATGGCATCAG TACAGTCTTT
TCGCGGCTAT TTAATTTTAT TTTGACCCCT CTGTTTACCA GGGCCTATCC TTCGGCTACT
TATGGCATCT TTACAAAGAT GTATGCCTAT GCATCAATGA TCAATGCAGT ATTGGCTTTC
GGTATGGAAA GTACTTATTT CAGGTACTTG AACAAGCATG AAGACAAAAA ACAAGAAGTG
TACAATAACT CGTTTTTATG CATTGTTTTT ATCTCGCTGC TATTCCTGAT CACCGGTTTT
GTTTTTGTAA ATCCAATTGC CAGATATCTT TCTGCTGACC CGGCACAGCT TGCTGATTAC
AAAAAGTATG TGCAATATTT TATCGGTATT TTATTTGTTG ATGCCATTTG CGTAATTCCC
TTTGCTAAAT TAAGGGCAGA AGACCGGGCC TTTAAGTACA GTGTGGTTAA GTTCCTGAAT
ATCGGAAGCT TTGTAGGCTT TAACTTGTTG TTTATTTTTG TGGTACCAGC CATCATTAAA
CACGAATGGC CAATGGCCGA CTGGCTGGTT TCGTGGTATC GGGAAAAATG GGTGGGTTAT
GTGTTCATTT CTAACTTAAT TGCCAGTTTG GTTACCTTTC TGTTGTTGCT ACCCGAGTTT
TTTAAGCTGC AACTCAGGTT TGACAGAGCG CTTTTTGCGA AGATGTTCAG ATATTCCTGG
CCTATCCTGG TGGCCAACCT GTCCTTCATC GTGAACGAAA ACCTTGACAA AATTGTTTTA
AGTGAACTTT TACCAGAGCA TATTGCTGAT CATGAGGTAG GTATTTATGG TGCTGTCTGT
AAAATCGCAG TTTTCATGAG CATATTTATT ACAGCATTCA GATTAGGGGC AGAACCTTTC
TTTTTTAGCT ACGCAAAAAA TGCAAACGCC AAAAATACTT ATGCACTGAT TTTGCATTAT
TTTGTAATTG CATTGGCGCT TTTATTTGTA GGATTGATTG CGAATATAGA GCTGCTCAAA
TATTTCATAA GCAGGGATAA GGCACATATA GCCGAATATT GGGTGGGCTT ACCTGCGGTA
CCCTACCTGC TTTTTGGTTA CGTATGCCTG GGTATTTATA TGAACTTATC TATCTGGTAC
CGCTTATCGG ATCAAACCAG GTTCGGTTTA TACATTTCTG TCGTTGGCGC CGTTATAACT
ATAGTGATGA ATTTTGTGCT GATTCCGAAA TATAGCTATA TGGGTTCTGC ATGGGTGTCT
ATGCTGGCCT ATTTTGTAAT GATGGTGATT TCTTATGTAC TTGGACAAAA ACACTATCCC
ATACCTTATG ACTTGAAAAG GATGATCACC TATCTGCTGG TTTCGGTACT GTTGGTAGTG
CTTTCTTTTT GGGTATTTAA CCGAAATATT TATATTGGTA ATACCATGCT TCTGGTTTTT
TTCGCCGGCA TTATTTATTT TGAAAAGGAT CAGTTGAAAC TTATATTAAA AAAACGATGA
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| Protein sequence | MSVLKKFLGQ TAVYGISTVF SRLFNFILTP LFTRAYPSAT YGIFTKMYAY ASMINAVLAF
GMESTYFRYL NKHEDKKQEV YNNSFLCIVF ISLLFLITGF VFVNPIARYL SADPAQLADY
KKYVQYFIGI LFVDAICVIP FAKLRAEDRA FKYSVVKFLN IGSFVGFNLL FIFVVPAIIK
HEWPMADWLV SWYREKWVGY VFISNLIASL VTFLLLLPEF FKLQLRFDRA LFAKMFRYSW
PILVANLSFI VNENLDKIVL SELLPEHIAD HEVGIYGAVC KIAVFMSIFI TAFRLGAEPF
FFSYAKNANA KNTYALILHY FVIALALLFV GLIANIELLK YFISRDKAHI AEYWVGLPAV
PYLLFGYVCL GIYMNLSIWY RLSDQTRFGL YISVVGAVIT IVMNFVLIPK YSYMGSAWVS
MLAYFVMMVI SYVLGQKHYP IPYDLKRMIT YLLVSVLLVV LSFWVFNRNI YIGNTMLLVF
FAGIIYFEKD QLKLILKKR
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