| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3835 |
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| Symbol | gatA |
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| ID | 8254969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4606803 |
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| End bp | 4608272 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644937499 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_003094088 |
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| Protein GI | 255533716 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.807685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.677458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGATTTTGA AGAAGTATAA CTCCTTAAAA GAGATACAAA GCCTTATTGA GCAAAAAGAG
CTTAGTTTAC CTGACTTATT GGACTATTAT TTTAAGCAGA TAGAAAAACA TCAACACCTC
AATGCCTTTA ATGAGGTGTT TTTTTATTCT GCAACAAACC AGGCTAAACT GGTACAGGAA
AAGATAGCAC AGGGAACAGC GGGTAAACTG GCAGGTATGG TGATTGGTAT AAAAGACAAT
ATCTGTTATA AAGACCATCA GGTTAGTGCC TCTTCTAAAA TGCTGGAAGG TTTTGTTTCC
CCTTATTCTG CCACAGTTGT TGAACGTCTG ATTGCTGAGG ATGCTGTGAT CATTGGCAGA
CTGAACTGCG ATGAGTTTGC GATGGGCGGC TCTAATGAAA CTTCGTATTA TGGGCCGGTT
AAAAATGCGG CCGACAGTGA AAAAGTCGCC GGAGGTTCAT CAGGAGGTTC GGCTGTTGCT
GTACAGGCCG ATCTTTGCCT TTCTGCTTTA GGAACAGACA CCGGAGGTTC GGTAAGACAG
CCTGCTGCAT TTTGTGGTTG TATAGGTTTA AAGCCTACTT ATGGGCGGAT TTCAAGATAT
GGCGTAATTG CTTATGCTTC ATCCTTTGAT CAGGTAGGTA CCATTACTTC TTCAGTTGGT
GATGCTTCAG TTTTACTGGA AGTTTTAGCT GGTGCAGATG ATTATGACAG CACGGTAGCC
AAATTGCCGG TGCCTGATTA TCAGGCCGGC CTGCTTGCAG ACAGTGCTGC TTTCGGGAAA
GGTACGTTTA AAAAGAAAAA AATTGCTGTT TTGAAGGAGA CTTTGGAAAG TGAAGCGCTG
GATACGGATA TCAAAAATGC AATATTAAAT GCCATCGGCG AATTAAAGGA ACAGGGACAT
ACGATTGAGT TTGTTTCTTT TGATCTGCTC GATTACCTGG TGCCAGCTTA TTATGTGCTG
ACTACAGCCG AGGCTTCCTC GAACCTGTCA CGCTACGATG GGGTACATTA CGGGCATCGC
AACATGGAAG CAACTAGCCT GAATGAACTT TATAAATTAT CGCGGGCTGA AGGTTTTGGT
GAGGAAGTGA AACGCCGGAT TTTATTGGGG ACATTTGTTT TAAGTGCAGG ATATTACGAT
GCTTATTACC AGAAAGCACA GCAGGTGAGG AGGCTGATCA GAGAGAAAAT GGAAGAACTG
CTAACCCGGT TTGACGTGAT AATAAGCCCA GTAGCACCAA CACCCGCCTT TAAAATAGGA
GAAAATATTG ACGATCCTTT GGTGATGTAC ATGGCTGATA TATTTACAGT ACTGGCCTCG
TTAACAGGTA TTCCTGCAAT TGCTGTCCCT TTGGGCAATA ATTATTCAGG TTTACCGTTA
AGTGTTCAGT TGATGGCCAG ACATTTTGGA GAGCAGGACC TGTTGTCTTT AGCTCATAAC
TTTTTAAATG CCAGGCAACT GACCAATTAA
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| Protein sequence | MILKKYNSLK EIQSLIEQKE LSLPDLLDYY FKQIEKHQHL NAFNEVFFYS ATNQAKLVQE
KIAQGTAGKL AGMVIGIKDN ICYKDHQVSA SSKMLEGFVS PYSATVVERL IAEDAVIIGR
LNCDEFAMGG SNETSYYGPV KNAADSEKVA GGSSGGSAVA VQADLCLSAL GTDTGGSVRQ
PAAFCGCIGL KPTYGRISRY GVIAYASSFD QVGTITSSVG DASVLLEVLA GADDYDSTVA
KLPVPDYQAG LLADSAAFGK GTFKKKKIAV LKETLESEAL DTDIKNAILN AIGELKEQGH
TIEFVSFDLL DYLVPAYYVL TTAEASSNLS RYDGVHYGHR NMEATSLNEL YKLSRAEGFG
EEVKRRILLG TFVLSAGYYD AYYQKAQQVR RLIREKMEEL LTRFDVIISP VAPTPAFKIG
ENIDDPLVMY MADIFTVLAS LTGIPAIAVP LGNNYSGLPL SVQLMARHFG EQDLLSLAHN
FLNARQLTN
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