| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3831 |
|---|
| Symbol | |
|---|
| ID | 8254965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 4595337 |
|---|
| End bp | 4602527 |
|---|
| Gene Length | 7191 bp |
|---|
| Protein Length | 2396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644937495 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003094084 |
|---|
| Protein GI | 255533712 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCCTTGA AAACCTTATT AACGCTATTT CTCTTCCTGA CAATTACTTT TAGCGGACAA
CAGGCTTTTT CGCAGGTTGT GCCACAAAAG GGGAAGCAGG ATACTTTAAA AAACTCTTTC
GGGCTGAAAG AGAAGCAAAG GCTTGGTATC AGGTCTTTGT CGGGCCCTTT TTATCCCTTA
CCCGAAAATA TGCACCGTAA GGTGGAATAT GATGCGCTTA ATAAGAGGTA TATTATCCAG
GAACTGATTG GCGACAAGCC TTTTGGCCAG GTGCAGTATA TGACTGTAGA TGAATACATG
CGCCTGGTGA ACAGTGAAAT TAAACGCGAA AACTGGCGGG TATTGTCTGA CCAGGAGGTG
AACGATGTAA GAAGAACGGG CATTATACCC AGTCTGAAAG TTAACAGCAA GGCTTTTGAA
CGGATATTTG GGGGCACAAC TATAGATATA CAGCCCCGTG GGGAAGCTGA GCTTACCTTT
TTGGGAAGGA TCAATAAAAA TGAGAATCCT TTGTTTAACG AGCGCCAGCG TGTACAGGGA
AATTTTGATT TTAACCAGCG CATACAGATG GATGTGATTG GTAATATTGG TACCAAGCTG
AAGATCAACA TGAACTACAA TACTGAAGCC CAGTTTGATT TTGAAAATCA GGTTAAGCTG
GACTATACCG GTGCTGAAGA TGATATCATA CAAAAAATTG AGGCGGGTAA TGTAAGCTTG
CCCTTAAATA CAACGCTAAT TAATGGTACT CAGGCCTTAT TTGGTATAAA GACACAGCTG
AAGTTTGGAA AACTGAATGT AGCAACTGTA TTTACACAGC AAAAATCGCA GTCGCGGGAA
ATTCAGATCA ACAATGGTGC GCAACAAAAT GAGTACCGGT TAAGTGCAGA TAATTATGAG
GCCAATAAAC ATTATTTTCT GGCCAGATAT TTCAGGGAGA ATTACAATAA AGTATTGTCG
AATCCCCCGA CCATCACTTC CGGGGTACTG ATTACCAAGG TAGAGGTCTG GATTACCAAT
AAAGCAGGAA ACACACAGGA TTCAAGGGAT GTGCTCGGTT TTATAGACCT TGGAGAAAAT
CAGACTTTTA ATCCGGGGAT TACCGGGGGT GCTTCAGTAC TGCCATCTGG TTTTACCAAT
CCTTTGTTTC CAAGAAATTC CAATGATCTT TTAACCAGGA TTCCGGCCAA TTCACGATTT
ACAAATTCTA ACGAGATCAT TTCATTTTTT GCAGGTAGTG GTGGTACGGA TAATTACGCC
AAGCTGACCT ATGCGCGGAA ACTGTCCGAC AGGGAATATA CTTTTCATCC CCAGCTGGGT
TATATCTCAC TGAACAATGC GCTGAACAGC GATGAGGTGT TAACCGTTGC TTACAGGTAC
ACTTACAATG GAGTGGAATA CCAGGTTGGA GAATTTTCTA CCGATGTTCC TTTTGACCCT
TCCACCCCTA AAGTTTTGTA TACCAAATTG CTGAAAAATG ATGTGATCAA AACCAATTTG
CCCACCTGGG ACCTGATGAT GAAAAACATT TATTCCATTG GAGGCTATCA GATCAGTCAG
CAGAACTTTA AACTGGATGT TTTCCGTATT GACGAAAAGA CCGGTGTAGA GAAGCCGCTG
ATACAGGAAG GACAGAAGCT GGATGCAGAC CGCCGGCCTT TGAACGGCAA GCAATGGATC
CAGGTGACGG GGCTTGACCG GCTGAACCAG CAGAAAGAAC GTAAACCTGA TGGGGTATTC
GATTTTGAAA CCGAAAACAA ACCTTTTGGA ACCAGTAGTA CAAATACACA GAATTCATCC
TATAACAACG GAAATTCGGG CAGTACAACA AACAACCAGG TAAATTTTTC GACCAACACC
ATTAACGGCT ATATCACCAT TGATCCCTTG AACGGAAGGG TCATATTTCC GCTGATTGAA
CCTTTTGGAA AAGACCTTGC AGATCAGTTT TTACCAACAG AACAGGCACT GATTGATAAA
TATACCTTTA CTGCATTATA CGATTCGACT AAGGTAGTTG CCCAGCAGCT GTTCAGTAAC
CAGAACCGGT ACATCATTAA AGGTGCCTAC CAGTCAGAAA TCGCTTCAGA GTTTAGCTTA
AATGCCATCA ATGTACCTGA AGGTTCTGTA AAAGTATTTG CAGGGACAAT TCCCTTACAG
GAAGGAGTTG ATTTTACAGT TGATTACCAG GGAGGCAGGG TGAGGATCAT TAATCCGGCT
TTACTGAGTT CTGGTCAGCC AATAAGGATT TCGACTGAAA ATAATGAATT GTTTGGTTTG
CAGCAACGTT CTTTATTTGG AACAAGGCTC GACTATAAAG TGAATAACAA GCTGAACCTT
GGAGGTACGT TGATGAACCT TACAGAGAAG CCGCTTACTG CCAAAGTAAA TATTGGTGAG
GAGCCGATCT CCAATACGAT GTGGGGACTT GACCTGAACT ACAGTTCTCC ATCCCGGTTT
TTGACCAAAC TGGTGGATAA GCTGCCTTTA TTATCGACTA AAGTGCCTTC CAATATCGCC
TTTTCCGGTG AGTTTGCACA ACTGATTCCC GGCCATCCAA GTGCCCTGAA CTTCGGCGGC
AATAAAGGTG GGGTGAGTTA CCTGGATGAT TTTGAAGCTT CTCGTTCAGT GATAGATCTG
AAAAGTGCGA TTGCCTGGCA ACTGTCGGGA ACGCCGCAGT TTTTCCCGGA AGCGAGCAGG
ATAGATGATT TGAGTTATGG CTTTAACAGG GCAAGAATTG CTTTTTATAA CATCGACCCG
ATTTTTTATA ACAGGAATAC AGGTACTATT CCGGATAACC TGAGAAATAA CCGGAATGAG
TTGTCTAATC ATTATGTGCG TGAGATTATA GAGCAGGAGG TTTTTCCTTT TAAAGAGACA
GCTACCGGGC AGGCCATTAC TTTGCCTACA TTGGATGTTG CATTTTATCC TATGGTTCGG
GGCCCTTACA ATTATACTAC AACTGGCTTT AATCCGAATG GTACACTGAC CAATCCAAGA
TCGCGCTGGG GTGGTTTGTT CAGGAAAATT GAAACCAGTG ACTTTCAGGC ATTGAACATC
GAGTATATCG AGCTTTGGGT AATGGACCCG AATATTTATA AACCAAACTC GACAGGAGGT
GACCTGTATT TTAACCTGGG GAACATATCG GAAGATATTT TAAAAGACGG GCGTAAATCG
TTGGAAAATG GTTTGCCCGC AAATGGTGAC CCGGAAAAAT ATGATGAGAC CAACTGGGGC
AGGGTACCTA AACTGCAACC GGTAGTGCAG GCATTTGACA ATGATCCTGC AGCCAGGAAA
GCACAGGATG TGGGTTTGGA TGGTCTGTCT AACGCGGATG AGAAAACCAA ATTTGCTGCA
CTGATTAACC AGATCAAAGG ACAGCTGAAC CCTGATGCAG CAGCTGAATT TGACAACGAC
CCCTCATCGG ACGATTATGT TTATTTTAGG GGCAGGGCGC TTGATCAGGT CAATGCAGGG
ATATTGAAAC GTTACCAGCG CTACAATGGA CCTGAGGGAA ATTCTAAAAC CGCACAGCAA
TCACAGGAAG ACTTTGGGGT AGACAATTCA GCTTCAACTT CTTTGCCAGA CGGAGAAGAT
ATCAACAGGG ACAACAACAT GACCCAGAGC GATGAATATT TCCAGTATAA GGTTTCTATG
CGCCCGGGTG ATTTAATGGT TGGGCAGAAT TTTGTTACAG ATAAAATCAC CTCACAGGTG
AAGCTGGCAA ATGGGCAAAC GCAGCCGGTT ACCTGGTATC AGATCCGGAT TCCCCTTGCT
CAGTATCAGC AAAAAGTGGG CAGTATCCAG GATTTTAAAT CCATCCGCTT TATCAGGATG
TTCATGACCA ATTTTGCCGA TACTACAGTA CTGAGGTTTG GAAAAATCCA GCTGGTAAGA
GGAGAGTGGA GGCAGTACAA TGCAAACAAC GAAGTTTCAC AGGTTATTCT GGATCCTGCA
CTGCAAAATT TAGGCCCCGA CAATTCAACT ATTGAAATAT CAACGGTAAA CATAGAAGAA
AATGGTAAGC GTACCCCTAT TCCTTACGTA GTACCACCTG GTATTGAAAG AGAACGTGAT
TTCAGCAATT ACCGGGGAGA TACAAGACAA AATGAGCAAT CGCTTGCAGT AACCATAAAA
AATTTACGTG ATGGTTATGG AAGGGCTACA TTTAAAACTG CATTGAACGA TTTCAGGTCG
TACAAACACC TGGAAATGTA CATTCACCTG GAAGCTCTGG GGAACGCGCC GATCAATGAC
AATGACCTGA GCGCTTTTTT AAGGATAGGT ACGGATAACC AGGACAACTA CTACGAATAT
TCACAGCCTT TGAAAGTGAC GCGTCCGGGT ACAAGTGACC CTTATGCGAT ATGGCCTGAT
CAGAATAAGC TGGATATTGA ACTGGAGTTG TTCCAGAAGG CGAAAATTGC CCGTAACAGT
GCCTTAGATG TAGATGGTCT GCCATGGAAC ATCAGTAAGC CATTTACTTA TATGGTTGAT
GGTAAAAAGA TTGTTGTAAA AGGGCAACCT GATATGAGCA AGGTGAGGGT ATATATGCTT
GGTGTATTGA ACCCTTACAG GAATGGGGCA AGCCCAGGTG ATGATGGTTT GGACAAAAGT
GCCCAGGTAT GGTTCAATGA GATGCGTTTA ACAGAATTTG ACGAACGGGG CGGATGGGCA
GCAACGGCAA GGATGAGTGC CAAACTGGCT GATTTTGCTG ATGTGAATGT ATCAGGTAGT
AAATCGACCA TAGGTTTTGG TTCCCTGGAA AAAAGAGTAA GCGAACGGAA CAGGGCAGAT
AATGTGTTTT TCGATATTTC ATCAAGTATG GAACTGGGTA AGTTTTTCCC TCAGAAAACA
GGGATCAAAA TCCCGATGTT TGTGAGTTAT TCGAGTCAGG TAAGCACGCC GCAATATGAC
CCGAAAATGC CTGATATTGA ATTGAAAAAT GCGCTGGACA AAGCTTCGAA ATCTGAAAAG
AAAGCAATTT TGGAGTATGC CCAGGATTAT ACGACCCGGA ACAGTATCAA TTTTACAAAT
GTGAGGAAGG AAAGGACAAA TCCGGACAAA AAATCGCAGG TGTGGGATAT AGAGAACTTT
AACGCAAGTT ATGCTTACAC AAAATTTGCA CACCGTGATT TTATCAACGA GAATAATGTG
CAGAAAACTT ACCGGGCATC GCTGGCTTAT AGTTATTCTG GGCAGGCGAA AAATGTGGAA
CCTTTTGCCA AGATCATCAA ATCTAATACC CTGGCCCTGT TAAAAGATTT TAACTTTAAT
CCATTACCCA ATGCGATCAA CTTCAGGATC GATGTAGACC GCTATTATTC GGAAAACAGT
TTGCGGAACA ATGATCCTAA TAATTCCATT CCTATTAACA CTACGTTTAA CAAAAACTTT
TTGATCACGA GGGTTTATGG CATTTCATGG AATTTAACAC GTTCATTAAC ACTGGATTTT
GATGCAACCA ATTATTCTAT TATAGATGAG CCTGAGGGCC GGATTGAAGG ATTAAAAAGA
GATACCATCT GGCAAAATTT AAAGCGCCTG GGCAGGACTA CGGATTATAA CCATAATTTA
AACGTGACTT ATTCATTACC GCTGAATAAG ATTCCGGGAA TGGACTGGGT AACAGTGGCT
ACAAGATATG GTACCAACTT TAACTGGCAG ACCGAGCCTT TATCTACATT AAGGGATCCG
CTGATCGACC TGGGTAATAC CATTCAGAAT TCAAGAACAA TACAGGTTAA CCCTACCTTA
AATCTTGCAG GGTTATACAA TAAATTTGGT TTTGTGAGGC GCGCAAATGG TGCGGGTGAT
AAGCCCTCGT CCGGGGCCTC ATTCTTTGTT GGTTTGTTAA CCAGTGTAAA AAATGTAAAT
GCAGCCTTTA CACAAACGAA AGGTATCTTT TTACCCGGAT ACTTGCCCCG TGTAAGTTAT
TTTGGCCTGG ATGAAGCAAC AGGAGCCCCT GGTTTGGGTT TTGTTTTTGG TAGTCAGCGT
GACATCCGGG AAATGGCCCT GAACAATGGC TGGATAACAA GAGATACCTT ACAATCACAG
CTTTACATCA ATACCTTAAG GGAAGACTTA AGTTTAACCG GGCTGATAGA GCCGATTAAA
GACCTGAGTA TTACCTTGAC AGCCAATAAA AACAGAACGC TCAACTACTC TACAAACTTT
CGGTATGACC AGTCGGCACG CGATTTTGAG AACCTGAGTC CTTTTACTAC CGGTGATTAC
AGTGTTTCCT TTATTTCGCT TAGGACTGCA TTTTCGGAGA AGCAGGGCAG TACGGTCTCA
AAATTATTTG CTGAATTTAT GGGCAACAGA CAGGTCATTT CACAACGTTT GGGGGCACAG
AATGTAAACT CTTCGGGCAA TATGCCAACA GGTTATGCAG ATGGATATGA TAAAAATTCG
CAGGATGTTC TTGTTTCGGC CTTTTTGGCT GCTTATACCG GAAAGAGTGC CTCTTCTATC
GGCCTGAACT CCCTGCCTAA AATTCCCTTA CCAAACTGGC GCCTGAACTA TAGGGGGTTG
ACCAGAATTG CTTTTCTGGC CGACAGGTTC AGTTCTATTG ATCTGAGGCA TGCTTACCGC
TCGGTATATA GCGTGAACGG TTTTAATTCA TTGATCCGTT ATAAAGAAAG CAACGGTTTT
GTAAGCAGCA GGGACGAGAA CAGCAACTTT TTGCCTTATT ACCAATATGC CCAGGTTACC
ATTGCAGAAC AGTTTTCTCC GTTGATTGGG GTGGATACCC GCTTAAAGAA CAACATGACC
GCCAATTTTG AGCTGGGAAG AACACGCTTA CTGGGACTGA GCCTAGCCAA CAGCCAGCTT
GCCCAGTTGT CAGAAAATAA CATGGTTTTT GGTCTGGGAT ACCGCACAAC TAAGTTTAGG
TTTCCATTCG GTCTGTTTAA GGGTTTAAAA ACTGATAACA ACATGGATTT TAAACTGGAT
GTGGCAATAA GGGACAATAA AACGGTAATT TACAGGGCTG ATGTTACTGA AGCAGAGGTC
TCATCAGGTG CTAAAAACAT TACTTTAAGA CCAAGTGTGG ATTATATTTT GAACCAGCGC
TTTAATGTAA GGCTGTTTTA TGACTCAAAT GTTACTAAGC CATACACCTC ACAAACCTTT
AATACTTCGT TTAGTAATTT TGGCTTTAGT TTAAGGATTA CGCTGAATTA G
|
|---|
| Protein sequence | MPLKTLLTLF LFLTITFSGQ QAFSQVVPQK GKQDTLKNSF GLKEKQRLGI RSLSGPFYPL
PENMHRKVEY DALNKRYIIQ ELIGDKPFGQ VQYMTVDEYM RLVNSEIKRE NWRVLSDQEV
NDVRRTGIIP SLKVNSKAFE RIFGGTTIDI QPRGEAELTF LGRINKNENP LFNERQRVQG
NFDFNQRIQM DVIGNIGTKL KINMNYNTEA QFDFENQVKL DYTGAEDDII QKIEAGNVSL
PLNTTLINGT QALFGIKTQL KFGKLNVATV FTQQKSQSRE IQINNGAQQN EYRLSADNYE
ANKHYFLARY FRENYNKVLS NPPTITSGVL ITKVEVWITN KAGNTQDSRD VLGFIDLGEN
QTFNPGITGG ASVLPSGFTN PLFPRNSNDL LTRIPANSRF TNSNEIISFF AGSGGTDNYA
KLTYARKLSD REYTFHPQLG YISLNNALNS DEVLTVAYRY TYNGVEYQVG EFSTDVPFDP
STPKVLYTKL LKNDVIKTNL PTWDLMMKNI YSIGGYQISQ QNFKLDVFRI DEKTGVEKPL
IQEGQKLDAD RRPLNGKQWI QVTGLDRLNQ QKERKPDGVF DFETENKPFG TSSTNTQNSS
YNNGNSGSTT NNQVNFSTNT INGYITIDPL NGRVIFPLIE PFGKDLADQF LPTEQALIDK
YTFTALYDST KVVAQQLFSN QNRYIIKGAY QSEIASEFSL NAINVPEGSV KVFAGTIPLQ
EGVDFTVDYQ GGRVRIINPA LLSSGQPIRI STENNELFGL QQRSLFGTRL DYKVNNKLNL
GGTLMNLTEK PLTAKVNIGE EPISNTMWGL DLNYSSPSRF LTKLVDKLPL LSTKVPSNIA
FSGEFAQLIP GHPSALNFGG NKGGVSYLDD FEASRSVIDL KSAIAWQLSG TPQFFPEASR
IDDLSYGFNR ARIAFYNIDP IFYNRNTGTI PDNLRNNRNE LSNHYVREII EQEVFPFKET
ATGQAITLPT LDVAFYPMVR GPYNYTTTGF NPNGTLTNPR SRWGGLFRKI ETSDFQALNI
EYIELWVMDP NIYKPNSTGG DLYFNLGNIS EDILKDGRKS LENGLPANGD PEKYDETNWG
RVPKLQPVVQ AFDNDPAARK AQDVGLDGLS NADEKTKFAA LINQIKGQLN PDAAAEFDND
PSSDDYVYFR GRALDQVNAG ILKRYQRYNG PEGNSKTAQQ SQEDFGVDNS ASTSLPDGED
INRDNNMTQS DEYFQYKVSM RPGDLMVGQN FVTDKITSQV KLANGQTQPV TWYQIRIPLA
QYQQKVGSIQ DFKSIRFIRM FMTNFADTTV LRFGKIQLVR GEWRQYNANN EVSQVILDPA
LQNLGPDNST IEISTVNIEE NGKRTPIPYV VPPGIERERD FSNYRGDTRQ NEQSLAVTIK
NLRDGYGRAT FKTALNDFRS YKHLEMYIHL EALGNAPIND NDLSAFLRIG TDNQDNYYEY
SQPLKVTRPG TSDPYAIWPD QNKLDIELEL FQKAKIARNS ALDVDGLPWN ISKPFTYMVD
GKKIVVKGQP DMSKVRVYML GVLNPYRNGA SPGDDGLDKS AQVWFNEMRL TEFDERGGWA
ATARMSAKLA DFADVNVSGS KSTIGFGSLE KRVSERNRAD NVFFDISSSM ELGKFFPQKT
GIKIPMFVSY SSQVSTPQYD PKMPDIELKN ALDKASKSEK KAILEYAQDY TTRNSINFTN
VRKERTNPDK KSQVWDIENF NASYAYTKFA HRDFINENNV QKTYRASLAY SYSGQAKNVE
PFAKIIKSNT LALLKDFNFN PLPNAINFRI DVDRYYSENS LRNNDPNNSI PINTTFNKNF
LITRVYGISW NLTRSLTLDF DATNYSIIDE PEGRIEGLKR DTIWQNLKRL GRTTDYNHNL
NVTYSLPLNK IPGMDWVTVA TRYGTNFNWQ TEPLSTLRDP LIDLGNTIQN SRTIQVNPTL
NLAGLYNKFG FVRRANGAGD KPSSGASFFV GLLTSVKNVN AAFTQTKGIF LPGYLPRVSY
FGLDEATGAP GLGFVFGSQR DIREMALNNG WITRDTLQSQ LYINTLREDL SLTGLIEPIK
DLSITLTANK NRTLNYSTNF RYDQSARDFE NLSPFTTGDY SVSFISLRTA FSEKQGSTVS
KLFAEFMGNR QVISQRLGAQ NVNSSGNMPT GYADGYDKNS QDVLVSAFLA AYTGKSASSI
GLNSLPKIPL PNWRLNYRGL TRIAFLADRF SSIDLRHAYR SVYSVNGFNS LIRYKESNGF
VSSRDENSNF LPYYQYAQVT IAEQFSPLIG VDTRLKNNMT ANFELGRTRL LGLSLANSQL
AQLSENNMVF GLGYRTTKFR FPFGLFKGLK TDNNMDFKLD VAIRDNKTVI YRADVTEAEV
SSGAKNITLR PSVDYILNQR FNVRLFYDSN VTKPYTSQTF NTSFSNFGFS LRITLN
|
|---|
| |