Gene Phep_3830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3830 
Symbol 
ID8254964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4594856 
End bp4595236 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content41% 
IMG OID644937494 
Productglycine cleavage system H protein 
Protein accessionYP_003094083 
Protein GI255533711 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0509] Glycine cleavage system H protein (lipoate-binding) 
TIGRFAM ID[TIGR00527] glycine cleavage system H protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.741858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTC CATCAGAATT AAAGTACACT AAAGACCACG AATGGGTTAA GATTGAAGGT 
AATGAAGCTT TTATTGGAAT TACAGATTTT GCACAGCGTG AATTGGGTGA TATTGTATAT
ATTGACATCA ATACCGTAGG TGATGAGGTA GCTAAAGATG ATGTATTTGG TACTGTTGAG
GCAGTTAAAA CGGTTTCTGA CCTGTTTATG CCCCTAACCG GAACGATATT GGAAGTAAAT
GCTGCCCTGA ATGATAATCC TGAACTGGTA AATACGGATC CCTATGGTCA GGGCTGGATG
GTAAAAGTAA CAGTTTCCGA TGCTGCGCAA GCAGAGGGAC TATTGACTGC TGATGCTTAC
AAAGCCCTTG TAGGCGCTTA G
 
Protein sequence
MNFPSELKYT KDHEWVKIEG NEAFIGITDF AQRELGDIVY IDINTVGDEV AKDDVFGTVE 
AVKTVSDLFM PLTGTILEVN AALNDNPELV NTDPYGQGWM VKVTVSDAAQ AEGLLTADAY
KALVGA