| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3820 |
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| Symbol | |
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| ID | 8254954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4583951 |
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| End bp | 4584844 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644937484 |
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| Product | Sec-independent protein translocase, TatC subunit |
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| Protein accession | YP_003094073 |
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| Protein GI | 255533701 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00172839 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATA ATAAAAAACG TGACCTGATT GGGGCCATCA AAGAAAAAGG AAAGACTTTA
GAGGCAGAAA TGTCTTTTTT TGACCATATA GATGTACTTA GAAAACATTT ACTACGCTCA
TTACTGGTCG TAGTATTATT TACCATAGGC GCATTCTGGT TTTCAGACTT TATATTTAAT
GATCTGATCA TGGGGCCTAA GAACCCTGAT TTCTGGACTT ACAGAATGAT GTGCAAGATG
GCTGCTGCAT GGCCGAACCT GATCGGTTCA GACTTTTGCA TCACGCATAT TGATGCCAAG
ATCATCAATA CAGAAATGGC CGGACAGTTT ACCCTGCAGA TCAATGCCTG CGTAATGGTC
GGCATTATAC TCGGCATCCC ATATATTTTA TTTGAACTAT GGCTGTTCAT TAAACCTGCC
TTACACGACA ATGAGCGCAA ATCGGCCAGT CATTTTGTGA TGTTTGCCTC TACACTTTTC
TTCATAGGGA TCCTGTTCGG TTATTATATA GTATGTCCGC TGTCCGTAAA CTTCCTCACA
AATTTTACGG TAAGCCCTGA TATACAGAAT ACCTTTACCA TCACTTCTTA TCTTTCTTCT
GTAGCGACAT TAACCATTGG CTCCGGGATC ATCTTTCAGC TGCCCGTAGT GATTTATATT
CTGTCAAAGT TCGGTATCAT GACCCCTAAG TTCATGCGTT CAACCAGAAG ATATGCCGCT
GTAATTATCC TCATTGTTGC TGCAGTTGTA ACACCTACAG CAGACGTGAT GACAATGCTT
GTAGTAGCCT TCCCACTATT TGTACTATAC GAACTGAGTA TCTTTATATC AGCTAATATT
GAGCGCAAAA GAAATAAGGA GCTTTATGGG GTAGCCAAAG TAAAGAAATC GTAA
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| Protein sequence | MSDNKKRDLI GAIKEKGKTL EAEMSFFDHI DVLRKHLLRS LLVVVLFTIG AFWFSDFIFN
DLIMGPKNPD FWTYRMMCKM AAAWPNLIGS DFCITHIDAK IINTEMAGQF TLQINACVMV
GIILGIPYIL FELWLFIKPA LHDNERKSAS HFVMFASTLF FIGILFGYYI VCPLSVNFLT
NFTVSPDIQN TFTITSYLSS VATLTIGSGI IFQLPVVIYI LSKFGIMTPK FMRSTRRYAA
VIILIVAAVV TPTADVMTML VVAFPLFVLY ELSIFISANI ERKRNKELYG VAKVKKS
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