Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3817 |
Symbol | |
ID | 8254951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 4580978 |
End bp | 4581967 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644937481 |
Product | 3-oxoacyl-(acyl-carrier-protein) synthase III |
Protein accession | YP_003094070 |
Protein GI | 255533698 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0177097 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAA TTCACGCTGC GATTACAGCT GTTCATGGTT ATGTGCCAGA CTACGTACTG ACCAACAAAG AGCTTGAATC AATTGTAGAC ACTACGGATG AATGGATCAC ATCCAGAACA GGTATCAAAG AGCGAAGAAT ATTGAAAGGT GAAGGATTAG GCACTTCAGA TATGGCTGTA CATGCCGTAA ATGGTTTGCT AAAGAAACGC GGGATCAGCG CAGAAGAAAT TGAACTGATT ATCTTTTGCA CCACAACACC GGACATGCCT TTCCCGGCAT CTGCAAATAT TCTGGCAGAT AAGATTGGCG CTAAAAATGC ATGGGGATAT GATCTTCAGG CCGCCTGTTC AGGTTTCATT TTTGGATTAT CAACGGCATC ACAGTTTATT GAATCTGGAA AACATAAAAA AGTACTGGTA GTGGGCGGTG ATAAAATGTC ATCGATCATT AATTACCAGG ACCGTACTAC CTGCATCATT TTTGGTGATG GCTGTGGTGC AGTTTTACTG GAACCCAATG AAGAAGGTCT CGGCATCATG GATTCTATAT TAAGAACCGA TGGAGCCGGA AAACAATTTT TACACCAGAA AGCCGGCGGA TCGGCCCGAC CTGCAACACA CGAAACTATA GACAACAATG AGCATGTGGT TTACCAGGAA GGCCAGGCCG TGTTTAAATT TGCAGTAACC AATATGGCGG ATGTTGCTGC CGAGATTATG GAACGTAACA ACCTTACCTC CGATGATGTA ACCTGGCTGG TACCACACCA GGCCAACAAG CGGATCATTG ATGCTACTGC AAACAGAATG GGCGTAGGTT CGGAAAAAGT AATGATCAAC ATACAGCGTT ATGGCAATAC CACTAATGGT ACAATCCCCC TATGTTTGTG GGAATGGGAA AACCAGTTGA AAAAAGGCGA CAATCTGATA TTGGCCGCAT TTGGAGGAGG CTTTACCTGG GGTTCTGTTT ATTTAAAATG GGCCTATTAA
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Protein sequence | MNKIHAAITA VHGYVPDYVL TNKELESIVD TTDEWITSRT GIKERRILKG EGLGTSDMAV HAVNGLLKKR GISAEEIELI IFCTTTPDMP FPASANILAD KIGAKNAWGY DLQAACSGFI FGLSTASQFI ESGKHKKVLV VGGDKMSSII NYQDRTTCII FGDGCGAVLL EPNEEGLGIM DSILRTDGAG KQFLHQKAGG SARPATHETI DNNEHVVYQE GQAVFKFAVT NMADVAAEIM ERNNLTSDDV TWLVPHQANK RIIDATANRM GVGSEKVMIN IQRYGNTTNG TIPLCLWEWE NQLKKGDNLI LAAFGGGFTW GSVYLKWAY
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