Gene Phep_3800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3800 
Symbol 
ID8254934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4566869 
End bp4567825 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content42% 
IMG OID644937464 
ProductMethylenetetrahydrofolate reductase (NAD(P)H) 
Protein accessionYP_003094053 
Protein GI255533681 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0685] 5,10-methylenetetrahydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.880865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA TAGATCATAT AAATAACGCC AAAGGAAAAA CCTTATTCTC ATTTGAACTG 
TTGCCACCCA TTAAAGGGCA AAGCATTAAA GGAATATTTG ATGCCATAGA TCCATTAATG
GAATTTAATC CGCCTTTTAT TGATGTAACT TATCTTCGCG AAGATTACAT TTATAAGCAA
CATGCCAATG GCCTCCTGGA AAAGGTGGCC TATCGCAAAC GCCCGAGTAC GGTAGCCACC
TGTGCTGCAA TTATGAACAG GTACAAAGTG GATGCTGTAC CACATTTGAT TTGCGGTGGT
TTTACAAAAG ATGAGACAGA AAATGCCCTG ATCGACCTGC AGTTTTTGGG TATAGATAAT
GTACTGGTTT TAAGGGGTGA TGCACGTAAA AGCGATAGTT CTTTCATTCC AACACCAAAT
GGCCATGCTT ACGCTTCGGA ACTGCTGCAA CATGTGGTAG ACATGAACAA CGGCAAATAC
CTGCATGACG ACATGGAAAG TGCAGAAAAA ACAGACTTTT GCATTGGTGT GGCGGGTTAT
CCGGAAAAAC ATTTTGAATC ACCAAACCTG GATACAGATT TCAGATACCT GAAACACAAA
GTAGATACCG GGGCTGATTT TATTGTGACC CAGATGTTCT TCGACAATAA GAAATATAAA
GCTTTTGTGG ATAAATGCAG AGAAAATGGC ATCCATGTAC CCATCATACC GGGGTTAAAA
CCAATTACCA GCAGCAAACA GCTGATCAGC CTGCCTAAAA TATTTCACCT GGATATTCCA
ATAGAACTGA GCGAAGCGGT ACATGGCTGT AAATCAGAGA AGGAAGTTAA AGAAGTTGGT
ATTGAATGGA TGATCAATCA GTGCAATGAG CTGAAGGCAA TGGGTGCGCC GGTGCTGCAT
TTCTATACGA TGGGCAATCC GGAACCGACC AAAAAGATTG CGCAGGCGGT ATTTTAG
 
Protein sequence
MKIIDHINNA KGKTLFSFEL LPPIKGQSIK GIFDAIDPLM EFNPPFIDVT YLREDYIYKQ 
HANGLLEKVA YRKRPSTVAT CAAIMNRYKV DAVPHLICGG FTKDETENAL IDLQFLGIDN
VLVLRGDARK SDSSFIPTPN GHAYASELLQ HVVDMNNGKY LHDDMESAEK TDFCIGVAGY
PEKHFESPNL DTDFRYLKHK VDTGADFIVT QMFFDNKKYK AFVDKCRENG IHVPIIPGLK
PITSSKQLIS LPKIFHLDIP IELSEAVHGC KSEKEVKEVG IEWMINQCNE LKAMGAPVLH
FYTMGNPEPT KKIAQAVF