Gene Phep_3797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3797 
Symbol 
ID8254931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4555892 
End bp4557904 
Gene Length2013 bp 
Protein Length670 aa 
Translation table11 
GC content44% 
IMG OID644937461 
ProductHeparinase II/III family protein 
Protein accessionYP_003094050 
Protein GI255533678 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAACCA TTAATCTAAA TCTTAAAGAT TGCATGACTA CGAAAATTTT TAAAAGGATC 
ATTGTATTTG CTGTAATTGC CCTATCGTCG GGAAATATAC TTGCACAAAG CTCTTCCATT
ACCAGGAAAG ATTTTGACCA CATCAACCTT GAGTATTCCG GACTGGAAAA GGTTAATAAA
GCAGTTGCTG CCGGCAACTA TGACGATGCG GCCAAAGCAT TACTGGCATA CTACAGGGAA
AAAAGTAAGG CCAGGGAACC TGATTTCAGT AATGCAGAAA AGCCTGCCGA TATACGCCAG
CCCATAGATA AGGTTACGCG TGAAATGGCC GACAAGGCTT TGGTCCACCA GTTTCAACCG
CACAAAGGCT ACGGCTATTT TGATTATGGT AAAGACATCA ACTGGCAGAT GTGGCCGGTA
AAAGACAATG AAGTACGCTG GCAGTTGCAC CGTGTAAAAT GGTGGCAGGC TATGGCCCTG
GTTTATCACG CTACGGGCGA TGAAAAATAT GCAAGAGAAT GGGTATATCA GTACAGCGAT
TGGGCCAGAA AAAACCCATT GGGCCTGTCG CAGGATAATG ATAAATTTGT GTGGCGGCCC
CTTGAAGTGT CGGACAGGGT ACAAAGTCTT CCCCCAACCT TCAGCTTATT TGTAAACTCG
CCAGCCTTTA CCCCAGCCTT TTTAATGGAA TTTTTAAACA GTTACCACCA ACAGGCCGAT
TATTTATCTA CGCATTATGC CGAACAGGGA AACCACCGTT TATTTGAAGC CCAACGCAAC
TTGTTTGCAG GGGTATCTTT CCCTGAATTT AAAGATTCAC CAAGATGGAG GCAAACCGGC
ATATCGGTGC TGAACACCGA GATCAAAAAA CAGGTTTATG CCGATGGGAT GCAGTTTGAA
CTTTCACCAA TTTACCATGT AGCTGCCATC GATATCTTCT TAAAGGCCTA TGGTTCTGCA
AAACGAGTTA ACCTTGAAAA AGAATTTCCG CAATCTTATG TACAAACTGT AGAAAATATG
ATTATGGCGC TGATCAGTAT TTCACTGCCA GATTATAACA CCCCTATGTT TGGAGATTCA
TGGATTACAG ATAAAAATTT CAGGATGGCA CAGTTTGCCA GCTGGGCCCG GGTTTTCCCG
GCAAACCAGG CCATAAAATA TTTTGCTACA GATGGCAAAC AAGGTAAGGC GCCTAACTTT
TTATCCAAAG CATTGAGCAA TGCAGGCTTT TATACGTTTA GAAGCGGATG GGATAAAAAT
GCAACCGTTA TGGTATTAAA AGCCAGTCCT CCCGGAGAAT TTCATGCCCA GCCGGATAAC
GGGACTTTTG AACTTTTTAT AAAGGGCAGA AACTTTACCC CAGACGCCGG GGTATTTGTG
TATAGCGGCG ACGAAGCCAT CATGAAACTG CGGAACTGGT ACCGTCAAAC CCGCATACAC
AGCACGCTTA CACTCGACAA TCAAAATATG GTCATTACCA AAGCCCGGCA AAACAAATGG
GAAACAGGAA ATAACCTTGA TGTGCTTACC TATACCAACC CAAGCTATCC GAATCTGGAC
CATCAGCGCA GTGTACTTTT CATCAACAAA AAATACTTTC TGGTCATCGA TAGGGCAATA
GGCGAAGCTA CCGGAAACCT GGGCGTACAC TGGCAGCTTA AAGAAGACAG CAACCCTGTT
TTCGATAAGA CAAAGAACCG GGTTTACACC ACTTACAGAG ATGGTAACAA CCTGATGATC
CAATCGTTGA ATGCGGACAG GACCAGCCTC AATGAAGAAG AAGGAAAGGT ATCTTATGTT
TACAATAAGG AGCTGAAAAG ACCTGCTTTC GTATTTGAAA AGCCTAAAAA GAATGCCGGC
ACACAAAATT TTGTCAGTAT AGTTTATCCA TACGACGGCC AGAAGGCTCC AGAGATCAGC
ATACGGGAAA ACAAGGGCAA TGATTTTGAG AAAGGCAAGC TTAATCTAAC CCTTACCATT
AACGGAAAAC AACAGCTTGT GTTGGTTCCT TAG
 
Protein sequence
MLTINLNLKD CMTTKIFKRI IVFAVIALSS GNILAQSSSI TRKDFDHINL EYSGLEKVNK 
AVAAGNYDDA AKALLAYYRE KSKAREPDFS NAEKPADIRQ PIDKVTREMA DKALVHQFQP
HKGYGYFDYG KDINWQMWPV KDNEVRWQLH RVKWWQAMAL VYHATGDEKY AREWVYQYSD
WARKNPLGLS QDNDKFVWRP LEVSDRVQSL PPTFSLFVNS PAFTPAFLME FLNSYHQQAD
YLSTHYAEQG NHRLFEAQRN LFAGVSFPEF KDSPRWRQTG ISVLNTEIKK QVYADGMQFE
LSPIYHVAAI DIFLKAYGSA KRVNLEKEFP QSYVQTVENM IMALISISLP DYNTPMFGDS
WITDKNFRMA QFASWARVFP ANQAIKYFAT DGKQGKAPNF LSKALSNAGF YTFRSGWDKN
ATVMVLKASP PGEFHAQPDN GTFELFIKGR NFTPDAGVFV YSGDEAIMKL RNWYRQTRIH
STLTLDNQNM VITKARQNKW ETGNNLDVLT YTNPSYPNLD HQRSVLFINK KYFLVIDRAI
GEATGNLGVH WQLKEDSNPV FDKTKNRVYT TYRDGNNLMI QSLNADRTSL NEEEGKVSYV
YNKELKRPAF VFEKPKKNAG TQNFVSIVYP YDGQKAPEIS IRENKGNDFE KGKLNLTLTI
NGKQQLVLVP