Gene Phep_3796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3796 
Symbol 
ID8254930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4554576 
End bp4555805 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content41% 
IMG OID644937460 
Producthypothetical protein 
Protein accessionYP_003094049 
Protein GI255533677 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAG TCCTGCTGGT ATTTCTGCTT ATCGTATATA CAAGCTTTCC TTCATCCGCC 
CAAAACTCAT TCTCCATAAC CGGTACTGTC AAAGATCAAA AAGAAAGTCT GCCAGGTGCG
GGGGTATATT TAAGTGGTTA TAAGGTTTCA ACAGTAGCCG ATGCTGAAGG GAAATTCAAG
ATCAATAACC TGAAGCCGGG AAATTATGAC CTGATGGTAC AAATGGTGGG TTACCTTCCT
TATTCAAAAA ATGTGATTAT CTCTGACAAA TCTGTTCAGG TGGAGCTGAT CTTAAAGGAA
AGTACTACAG TTTTGAATGA GGTAGTGATC CGGGCAGACC CAAACCGGGC CAAATACATC
AAACAGTTTA AAGAATTCTT TATTGGCACC ACACCCAATG CTGCCCAATG TAAAATACTA
AATCCCCAGG TATTAAATAT TGATTATGAT GTAACCAAAA GTACCTTAAC CATAAAAACC
TCAGAATTTT TAATTGTCGA AAACAAGGCT TTGGGTTACC GTTTAAAATA TATGCTGGAT
AACTTTGAAT ACAACTCAAG GACCCGCATC ATCTATTTTT CCGGACATCC ATTTTTTGAA
GAATTAAAAG CTTCGGGTGC AAAACTGAAA AAATACATTG ATAAGCGTGA AACGGCTTAT
TATGGTTCTT CCCAGCACTT TTTCAGATCC CTGTATGCAG GAAATGTGAG TGAGCAGGGT
TTTATCCTGA ACAGGATGAT AAAAATACCT AACCCTAACC GCTACCCCGA CAGCATTATT
CATAAAAACC TGGTCAGGTT AAAAACACCG CCAAAATCAA CTGTCATTGG TAAGGGCAGC
ATGCTCCGGG ACAGTGCAAT GATCGCTTTC TGGATAAAAC AACAGGACAT GCCCCGATAC
GTAGACTACC TTGACCGTAA AGAAATTTCA GCGGCCAGCC TGGTCTCCAC TTTTAACCAG
AATTTAAAAT TGCTGGACTG CAGCGGAGCA CTGGCCATCA GTTATACCAA AGAGAAAGAA
ACCCTGGCTT ATTCTAAAAC AGGGTTCTGG GTATTCCGTC CGCTCGACAT ACCAGACTAT
GAAATATCTG TAGCCAACAT AACGCAAAAC ACGGTACGAT TTTATGAAAA CGGCAGCATA
TACGATTCCA GGGCCATGCT ATATGAAGGC TTTTGGGCCT ATGAAAAGGT AGCCGATATG
GTGCCGATGG ATTATGTCCC GATCCATTAA
 
Protein sequence
MTKVLLVFLL IVYTSFPSSA QNSFSITGTV KDQKESLPGA GVYLSGYKVS TVADAEGKFK 
INNLKPGNYD LMVQMVGYLP YSKNVIISDK SVQVELILKE STTVLNEVVI RADPNRAKYI
KQFKEFFIGT TPNAAQCKIL NPQVLNIDYD VTKSTLTIKT SEFLIVENKA LGYRLKYMLD
NFEYNSRTRI IYFSGHPFFE ELKASGAKLK KYIDKRETAY YGSSQHFFRS LYAGNVSEQG
FILNRMIKIP NPNRYPDSII HKNLVRLKTP PKSTVIGKGS MLRDSAMIAF WIKQQDMPRY
VDYLDRKEIS AASLVSTFNQ NLKLLDCSGA LAISYTKEKE TLAYSKTGFW VFRPLDIPDY
EISVANITQN TVRFYENGSI YDSRAMLYEG FWAYEKVADM VPMDYVPIH