| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3791 |
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| Symbol | |
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| ID | 8254925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4549650 |
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| End bp | 4550255 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644937455 |
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| Product | RNA polymerase sigma-70 factor |
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| Protein accession | YP_003094044 |
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| Protein GI | 255533672 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATCAGG AAAGGGGAAG TAATTCAAAT GAAATTCAGC TGCTGATTGC GCTTAAATCG
GGAGACCGGC TTGCATTTGA AAAAATTTAC CAGAGCTATA GCCCCAGGAT CTTCCTGAAT
ATCTTAAAGA TGGTGAAATC TGTTGAAGAT GCCCAGGAAA TCCTGCAGGA TGTATTCATT
AAGGTCTGGG AAAAGCGGGG CCTTATTGAT CCCGAACAAT CCTTTAAATC TTATTTATTT
CAGATTTCCA AATTCACTGT GTATAACTTT ATCCGCAAGC TCAATCTGGA TAAAAAGCTA
AAAACTTATC TCAGTCTCGA AAACACAGAG TTGTATACAC ATATTGAGGA AGGAATCGCC
TACAGGGAAA ATGATCAGTT TATCCTCAAT GCAATTGAGG AATTACCCAG CCAGCGAAAG
CAAATCTATA AATTGTGCAA AATTGAAGGT AAAAGTTATG CAGAGGTGGG TAAACAACTG
GGAATTTCTT CTTCTACAAT TAATGATCAT ATTGTTAAGG CTACAAAATT TTTAAAACAA
CGCCATGCAT CTTTCGGTGC TGCGGTTACT TTGACCGTAA TTTCAGTGTT TTTAAAAAAT
CTTTAA
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| Protein sequence | MHQERGSNSN EIQLLIALKS GDRLAFEKIY QSYSPRIFLN ILKMVKSVED AQEILQDVFI
KVWEKRGLID PEQSFKSYLF QISKFTVYNF IRKLNLDKKL KTYLSLENTE LYTHIEEGIA
YRENDQFILN AIEELPSQRK QIYKLCKIEG KSYAEVGKQL GISSSTINDH IVKATKFLKQ
RHASFGAAVT LTVISVFLKN L
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