Gene Phep_3790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3790 
Symbol 
ID8254924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4548405 
End bp4549583 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content42% 
IMG OID644937454 
ProductFecR protein 
Protein accessionYP_003094043 
Protein GI255533671 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAAATT TAGATAAGAT AGAAACCTCC TTTTACAAAT ACCTGAACAA TGAATTGGGG 
GAAGAAGAGG CGAGACAATT TCTTGAACAT TTGCAGTCAG GTGCCGACAA GGACGTCTTT
TTGCAATTGA TAGAAAATGG TCTGGAAGGG CCGCTTGCTG ATCAGTTGCT GGGCAAACCT
GAACTTTTTA CCTTGCTAAA CCAGTCTTTT GCAAAAGTGG TTCACACCAT TGATACTAAA
TCCGAAAAGA GCATCACTAA GTTATGGCCA GGTATTGCTG CCGGGATAGC AGCAGCAGTT
GCTTTGATTA TACTTGGTAT TTATATTTTT AATGCGGTAC CTAAGTCTGA ACCTGGTTCG
GGACCTGAGT ATGTAAACAG CATCAAGCCA GGAAAAATGG GGGCCACATT AACACTGGCC
AACGGAAAAA CAATCGGATT GTCCGATGCC GCAAATGGCG AGCTTGCCAA AGAAGCTGGC
ATCAGTGTAA CCAAAATGGC AAACGGACAG CTGGTTTATG AAATTGAAGA GGGAAATGGT
GATCCGAGCA AAACCAATAC CCTAACTACT GCTAAAGGTG AGACCTATAT TTTAACCTTA
CCCGATAAAA CTAAAGTATG GATGAATGCG GCTTCAAGCC TCACCTACGC TGCGGGCTTA
AATCAAAGGG AGCGTAAAGT TATGCTTAAA GGGGAAGCCT ATTTTCAGGT AGCCGAAGAT
AAGACCCGCC CCTTTATTGT AGAGAGCGGG GGACAAAAAA TTGAGGTACT GGGTACGTGG
TTCAATGTGA ATGCTTATCC CGATGAAGAG AAAGTAACAA CTACACTTTT GAAAGGCAGT
GTAAAAGTAT CCGGAAAACC AGGATCCAAA ATCTTAAAGC CGGGAGACCA GTCGGCAGTA
AATGAAAAAT CGATTTCAAT TACTGAAGTA GATACGGAGC GTGCGGTAGC CTGGAAGGAC
AATAAGTTTC TTTTTGAAAA TGATGATATC CGGTATATCA TGCGCATGAT TGAACGCTGG
TATAATGTGG AGGTAGTTTA TATAGGAGAA ATGCCAACAG AGAAATTCGG AGGGGGAGTA
TCCCGCTTTG ACAATGTTTC GCAGGTATTG AAAATATTGG AATCTACCGG AGGTGCGCAT
TTTAAGATTG AAGGCAGGAG AATTTTGGTA TCAAAATAA
 
Protein sequence
MENLDKIETS FYKYLNNELG EEEARQFLEH LQSGADKDVF LQLIENGLEG PLADQLLGKP 
ELFTLLNQSF AKVVHTIDTK SEKSITKLWP GIAAGIAAAV ALIILGIYIF NAVPKSEPGS
GPEYVNSIKP GKMGATLTLA NGKTIGLSDA ANGELAKEAG ISVTKMANGQ LVYEIEEGNG
DPSKTNTLTT AKGETYILTL PDKTKVWMNA ASSLTYAAGL NQRERKVMLK GEAYFQVAED
KTRPFIVESG GQKIEVLGTW FNVNAYPDEE KVTTTLLKGS VKVSGKPGSK ILKPGDQSAV
NEKSISITEV DTERAVAWKD NKFLFENDDI RYIMRMIERW YNVEVVYIGE MPTEKFGGGV
SRFDNVSQVL KILESTGGAH FKIEGRRILV SK