Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3786 |
Symbol | |
ID | 8254920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4540599 |
End bp | 4541408 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644937450 |
Product | Endonuclease/exonuclease/phosphatase |
Protein accession | YP_003094039 |
Protein GI | 255533667 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGAA TTACATTTTT CCTTATTGCG CTCTTTCTGC AACTGAACCT CCGGCCCGAG GGGTATGCGC AAACAAAACC TGCTGATAAA AACGCAGGAA AGACATTGCG CATCATGAGT TATAACATCC ACCATGCAAA CCCGCCATCC AAACCAGACC TGATTGATCT GGATGCCATT GCCCGGGTGA TCACAGCTAG TAAGGCAGAC ATTGTAGCAC TACAGGAAGT AGAAACCGGT GTAAGCCGGA GCGGAGGGGC AAACGAAGCG AAGATACTTG CAGAAAAAAC AGGATTTCAG TACCATTTTT TTAAAGCCAT CGATTACGAT GGCGGTGATT ATGGGATTGC CATACTGAGC CGTTACCCAT TAAAGGAGAT CAGACTGGTA CCACTGCCAC AGCAAATCAC TGCCGAAAAA CGTATATTGG GTTATGCCAC CATAAAGGTA GGTAAACAGA AAATCATATT TGCAAATACC CACCTCGATG CAAGCAGGAC AGATGAAAAC AGGCTCGTCC AGATGCAAAG CATCCTTAAA GAATTTGAGC ATGCTGCGCT GCCGGTAATT TTATGTGGCG ACTTAAACAG CGTTGCTGGT TCATCAGTGA TCAGTTTACT TGATGCGCAG TTTAAACGTA CCTGTACAGA AAATTGTCCT CCTACCTCGC CCCAGATTAA CCCCCGTCGT ACTATAGATT ATATCGCCAC CAAAAATGTA ACCTGGCCTT TGCTGGAATA TCAGGTAATA GCAGAAACTT ATGCTTCAGA TCACAGACCT GTAATGGCAA TTTTTAACCT GGAAAAATAA
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Protein sequence | MNRITFFLIA LFLQLNLRPE GYAQTKPADK NAGKTLRIMS YNIHHANPPS KPDLIDLDAI ARVITASKAD IVALQEVETG VSRSGGANEA KILAEKTGFQ YHFFKAIDYD GGDYGIAILS RYPLKEIRLV PLPQQITAEK RILGYATIKV GKQKIIFANT HLDASRTDEN RLVQMQSILK EFEHAALPVI LCGDLNSVAG SSVISLLDAQ FKRTCTENCP PTSPQINPRR TIDYIATKNV TWPLLEYQVI AETYASDHRP VMAIFNLEK
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