Gene Phep_3777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3777 
Symbolera 
ID8254911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4530062 
End bp4530949 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content42% 
IMG OID644937441 
ProductGTP-binding protein Era 
Protein accessionYP_003094030 
Protein GI255533658 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCATA AAGCAGGTTT TGTAAGTATC ATCGGTAAGC CCAATGTGGG CAAATCAACC 
CTAATGAATG CCCTGGTGGG TGAAAAACTT TCTATCATCA CTCCAAAAGC GCAGACTACG
CGTCACCGGA TTTTAGGGAT TGTGAACGAA GAAAGTTATC AGATTGTTTT TTCTGATACC
CCGGGCATCA TAAAACCGCT ATACGGCTTA CAGGATTCGA TGATGAATTC TGTAAAAGGT
GCATTAACTG ATGCCGATCT GATCCTGTTT GTAACGGATA TCAATGAGCA GCATGATGAA
AATGATGTGC TGGAAAAAAT CACCAATACT GAAATCCCAT TGGTGGTGCT TTTAAATAAA
ATTGACAATG CTACTCAGGA GCAGGTGGAT GAAAAAGTAG CCTACTGGCA GGAGAAATTG
AATCCCAAAC ATATTTTTGC CATTTCTGCC CTGCACCAGT ACAACCTGGA GGGTATCATG
AGCATGGTAC TGGATTACTT GCCGGAACAT GCGCCTTTCT ATGACAAAGA AGACCTGACC
GACCGCAGCC AGCGCTTCTT CGTTTCGGAG ATCATAAGAG AAAAGATATT TTTCAACTAC
AAAAAAGAAA TCCCCTATAG CACAGAGGTA ATCGTTACAG CCTTTAAAGA AGAGCAAAGT
AAAAGCGGCC CAATGGTTCG CATTACCGCA GAAATTGTTG TGGAACGCGA TTCACAAAAG
AACATTCTGA TTGGCACTGG TGGTGCAATG CTTAAAAAAG TGGGAATGGA ATCCCGCAAG
GACATCGAAA AATTTCTGGA TCAGAAAGTT TTCCTGGAAA CTTTTGTAAA GGTAATCCCC
GATTGGCGCA GCAAAAAGAA CTACCTTAAA AGCTTTGGCT ACGACTAA
 
Protein sequence
MSHKAGFVSI IGKPNVGKST LMNALVGEKL SIITPKAQTT RHRILGIVNE ESYQIVFSDT 
PGIIKPLYGL QDSMMNSVKG ALTDADLILF VTDINEQHDE NDVLEKITNT EIPLVVLLNK
IDNATQEQVD EKVAYWQEKL NPKHIFAISA LHQYNLEGIM SMVLDYLPEH APFYDKEDLT
DRSQRFFVSE IIREKIFFNY KKEIPYSTEV IVTAFKEEQS KSGPMVRITA EIVVERDSQK
NILIGTGGAM LKKVGMESRK DIEKFLDQKV FLETFVKVIP DWRSKKNYLK SFGYD