| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3772 |
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| Symbol | |
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| ID | 8254904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4518894 |
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| End bp | 4520714 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644937434 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003094025 |
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| Protein GI | 255533653 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA AAAATATAAT CCACACCATA CTTTTAGGAC TTTTACTGAC TTCGACGGTT
TCTTGTAAGA AGTATTTTGA CAGGGATACC TATGACTCTA TCAGTTCAGA TAAGTTCTTT
GAATCAGAAT CTGATTTAGA ATTATATGCC AATGGTTTTA TACAAAAAAT GGTGCCTTCT
GCCACTACGA TAGGCTATAG TGACATCAAC GCTGATTATT GTGCCGTTAA TATCCCGCAT
GACCTGCTGA GAGCTGATGG CAATATTTCG CCTGGAAACC AGGGAGGATG GACTGAATCT
TCCTGGAGTA ACCTGCGGAA CATCAATTAT ATGCTGGTCA ACATGGTTAA GCTAAAAGGA
AAGGTCAGCA ATGAGGTTTA TAACCATTAC GAAGGTGTTG CGCGCTTCTG GAGGGCTTGG
TTTTACTTCG ACAAGGTAAA GACATTCGGA GCGGTACCTT ATTATGATTA TGTGCTTAAA
TCCAGCGATA CAGAAGCAAC TTCCAAAGCC CGGGATTCGA GGGAATTTGT AATGGATAAG
GTTTTGGAAG ACCTGAATTT TGCGGCCCAG AATTGCCTGG CTACCGATAA ATTTAAAGGG
GATGGTTCTG TCATCAATAA ATATGTGGCC CTGGCCTTCA AATCCCGTGT TTGTTTATTT
GAAGGAAGTT ACAGGAAATA CCATCAGGTG GATCCTTCGA CTGGCAATGC CTGGGTAAAT
TCACAGACGG CTTCAAATAA ATTCTTCAAT GAAGCGGTCA GTGCTTCTGA ACTGCTGATG
GGCTCAAATG TGTTTAGTTT AGTGGATGTG GATAAGGAAA AGTCGTACAG AAGTTTATTT
ACCTCTGAAA AACTATTGAC TGCCGAAGTA ATCTGGGGAC GTTACTTTAG CAAGGATTTG
TCTATACTTC ACGATTTGTC ATGGGTTTAT TATTCACCGA CATATGGTAG TAAGGTATCG
CTGACTAAAA GATTTGTAAA TACCTATCTG ATGAAAGACG GAAAACCATT TACCGACAAG
GCGAACTATA AAACCATCCC TTATACACAG GAGTTTACCG ACCGGGATAC CCGTCTGGCA
CAGACGGTAA TTTCTCCCAG TTATAAAATG ACAAACAATG GTACAACTGC ATTATACGCA
CCGAATTGGT TGGTAACGCG TACCGGGTAT CATCCAATAA AATTTTCTCT GGATAACAAT
GCTGATAATA TACTTTCAAG GGCCGCCAGC TGGAACAGTC TGCCGATATT CAGATTTGCA
GAAATCCTGC TAAATTTTGC AGAAGCTAAA GCTGAACTCG GTCAGTTCGG TCTTCCGGAA
TGGAACAAAT CTATTGCCCT GTTGCGTACA AGGGCTGGGG TTACACCAGT TTTTCCTACA
ACTGCCGATT CATATCTGGT AAATTATTAT CAGAATACCA TTAACGACCC ACTGATTTTA
GAAGTCCGCA GGGAAAGGGC CATAGAAATG TGCCTGGAAA TGGAATTACG CTGGGACGAT
TTGATGCGCT GGCATATGGG CGACCTGCTC AATAGCAGCA ACAATCCCTG GACCGGAATG
TATATTCCAA ACAAATCCCA GTCTTACGAC CTGAACGGTG ATGGACAGAT TGATTTTGAA
ATTGGTACTT CAGAAAGTGT AAAATCGATT GTGGTTAGTT CCAGTAATGT GAACCAGAGT
TTTTCTATAA ACGCAGACAA TAATCTGGTC TGGAATTATC AGCGTGTATG GGCAGAGTAT
AAATACCTGA GGCCAATACC AACAGAAGCA ATAATCAGAA ATCCAAACCT GACACAGAAT
TATCTGTGGA AGAATAAATA A
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| Protein sequence | MKKKNIIHTI LLGLLLTSTV SCKKYFDRDT YDSISSDKFF ESESDLELYA NGFIQKMVPS
ATTIGYSDIN ADYCAVNIPH DLLRADGNIS PGNQGGWTES SWSNLRNINY MLVNMVKLKG
KVSNEVYNHY EGVARFWRAW FYFDKVKTFG AVPYYDYVLK SSDTEATSKA RDSREFVMDK
VLEDLNFAAQ NCLATDKFKG DGSVINKYVA LAFKSRVCLF EGSYRKYHQV DPSTGNAWVN
SQTASNKFFN EAVSASELLM GSNVFSLVDV DKEKSYRSLF TSEKLLTAEV IWGRYFSKDL
SILHDLSWVY YSPTYGSKVS LTKRFVNTYL MKDGKPFTDK ANYKTIPYTQ EFTDRDTRLA
QTVISPSYKM TNNGTTALYA PNWLVTRTGY HPIKFSLDNN ADNILSRAAS WNSLPIFRFA
EILLNFAEAK AELGQFGLPE WNKSIALLRT RAGVTPVFPT TADSYLVNYY QNTINDPLIL
EVRRERAIEM CLEMELRWDD LMRWHMGDLL NSSNNPWTGM YIPNKSQSYD LNGDGQIDFE
IGTSESVKSI VVSSSNVNQS FSINADNNLV WNYQRVWAEY KYLRPIPTEA IIRNPNLTQN
YLWKNK
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