| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3769 |
|---|
| Symbol | |
|---|
| ID | 8254901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 4514835 |
|---|
| End bp | 4515860 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644937431 |
|---|
| Product | Alcohol dehydrogenase GroES domain protein |
|---|
| Protein accession | YP_003094022 |
|---|
| Protein GI | 255533650 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.109016 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAG CTACATTAAT TTCACCGGGG AATATTGTTT TTTCTGAAGT GGGTACACCA
ACTGAATTAG GGGATAATGA TGTTTTAATA AACATAAAAA AAATAGGTAT TTGCGGCTCT
GATATCCATG CTTATAAAGG GAAGCACCCT TTTACACCTT TTCCTGTAAT CCAGGGGCAT
GAATACAGCG GAGAGGTAGT TGCGATAGGG GCAGAGGTGC GATCTGTTAA GATTGGTGAT
AAGGTGACAG GCAGGCCTCA GCTGACTTGC GGTACATGCG GGCCTTGTTG TGCCGGATTG
TACAACGTAT GCGCTAATCT GAAAGTTGAA GGTTTTCAGG CACCGGGTAC GGCGAGGGAC
TATTTTGTGC TGCCCGAAGA CAGGACTTAT GTTGCGCCTG ATCAGGTTAG TTATGATGAA
ATTGCTTTGC TGGAGCCTGC AGCTGTAGCG GCGCATGCCA CGGCCATGAT CAGGGATATT
GAAAACAAAA ATATTGTGGT AACTGGTGCA GGTCCGATTG GTAACCTGAT TGCGCAGTTT
GCAAAAATCC GTGGTGCCAA ACGCGTGATT GTTACAGATT TCAATGATTT TCGTTTAAAC
CAGTTAAAGC AAACCGGTAT CGGCGATCTG ATAAATCTGA GTGTTGAAAC ATTTGAAGAA
GGAATTGACC GCATACTAAA AGGAGAAAGC TTCCAGGTAG GAATAGAAGC CGTAGGTGTG
GAGCCGGCAC TATATAACCT GATCAACAAT ATAGAAAAAG CTGGACAGGT ACTTATTGTT
GGTGTTTACG AAGAATTTCC GAGGTTAAAC ATGGGCTTTG TTGGTGAGCA TGAACTTTCT
ATCCAGGGTT CTATGATGTA TAAGCACGAA GATTATCTGC AGGCGCTGAA TTTTGTGGTG
TCGGGACAAC TCGTGTTGAA AACCCTGATT ACGCACCGGT TTGATTTTCA GGATTATAAT
GAAGCTTATG CATTTATTGA GAAGAATGCA TCACAAACTA TAAAAGTATT AATTGACGTA
AATTAG
|
|---|
| Protein sequence | MKQATLISPG NIVFSEVGTP TELGDNDVLI NIKKIGICGS DIHAYKGKHP FTPFPVIQGH
EYSGEVVAIG AEVRSVKIGD KVTGRPQLTC GTCGPCCAGL YNVCANLKVE GFQAPGTARD
YFVLPEDRTY VAPDQVSYDE IALLEPAAVA AHATAMIRDI ENKNIVVTGA GPIGNLIAQF
AKIRGAKRVI VTDFNDFRLN QLKQTGIGDL INLSVETFEE GIDRILKGES FQVGIEAVGV
EPALYNLINN IEKAGQVLIV GVYEEFPRLN MGFVGEHELS IQGSMMYKHE DYLQALNFVV
SGQLVLKTLI THRFDFQDYN EAYAFIEKNA SQTIKVLIDV N
|
|---|
| |