Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3762 |
Symbol | |
ID | 8254894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4507223 |
End bp | 4508107 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644937424 |
Product | glycerophosphoryl diester phosphodiesterase |
Protein accession | YP_003094015 |
Protein GI | 255533643 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0208318 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATAAAA TCAATAGAAA AAGTATAGGC TGTATTGTTG CTTTTTTGCT TTCAAGTGGT ATTTCGATTG CACAGGAGCA ACCGATGCAT ACAGTGAAAC TCACTAACTT TTCGGAGTTA CAGGAGTATT TTCATTATCA GGAAGGTAAA CCGGTGATTA TTTCCGGGCA CCGGGGTGGA ATGTTGCCCG GCTTTCCTGA GAATACAATC GAAGCAATGG CAAAAACACT GACCATTCTA CCTTCATTTT TTGAGATCGA CCCAAGGCTG ACCAAAGATT CGGCATTGGT ATTGATGCAT GATGCAACGC TGGACCGTAC GACGACTTTT AAAGGCAAAG TGTCGGACTA TACTTATGCA GAATTACAAA AGGCAAGGGT TAAAGACCGC GAAGGGAAGG TGACCCCGTT TAAAATACCT ACGCTGCAGG AAGCTTTGGA ATGGGGAAAA GATAAGACTA TTTTTAACCT GGACAATAAG GGTATCCCAT GGCAAAAGTA TGTAAATATG CTTAAAGACG GGCAATATCC AAATATCGTG CTAAGTGTAC GGTCGATGAA GGAAGCTTTA TTTTATTATG AGAAATTGGA TAAGGTCATG TTATGTGTGG CTATTCAGAA CCAAACTGAT CTGGATGCCT TTATCGCTAC AAAAATCCCA TTTAACCGGA TCATGGCTTA TGTGGGATAT ACGATGGAAC CGGCACATGA AAAAGTTTAT ACCTATTTAC GTGACCGGGG GGTAATGTGC TTTATTTCTA TCCCTTCAAC CGCAGACAAA AAACAAACGG ACTTAGAAAA AGTAAAAGCT TATTCTGAAG AACTGATCAA AAAGCCTGAT ATTATAGAGA CAGACTACCC TGCACTTTTT ATGAATGGAA AATAA
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Protein sequence | MYKINRKSIG CIVAFLLSSG ISIAQEQPMH TVKLTNFSEL QEYFHYQEGK PVIISGHRGG MLPGFPENTI EAMAKTLTIL PSFFEIDPRL TKDSALVLMH DATLDRTTTF KGKVSDYTYA ELQKARVKDR EGKVTPFKIP TLQEALEWGK DKTIFNLDNK GIPWQKYVNM LKDGQYPNIV LSVRSMKEAL FYYEKLDKVM LCVAIQNQTD LDAFIATKIP FNRIMAYVGY TMEPAHEKVY TYLRDRGVMC FISIPSTADK KQTDLEKVKA YSEELIKKPD IIETDYPALF MNGK
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