Gene Phep_3762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3762 
Symbol 
ID8254894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4507223 
End bp4508107 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content40% 
IMG OID644937424 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_003094015 
Protein GI255533643 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0208318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAAAA TCAATAGAAA AAGTATAGGC TGTATTGTTG CTTTTTTGCT TTCAAGTGGT 
ATTTCGATTG CACAGGAGCA ACCGATGCAT ACAGTGAAAC TCACTAACTT TTCGGAGTTA
CAGGAGTATT TTCATTATCA GGAAGGTAAA CCGGTGATTA TTTCCGGGCA CCGGGGTGGA
ATGTTGCCCG GCTTTCCTGA GAATACAATC GAAGCAATGG CAAAAACACT GACCATTCTA
CCTTCATTTT TTGAGATCGA CCCAAGGCTG ACCAAAGATT CGGCATTGGT ATTGATGCAT
GATGCAACGC TGGACCGTAC GACGACTTTT AAAGGCAAAG TGTCGGACTA TACTTATGCA
GAATTACAAA AGGCAAGGGT TAAAGACCGC GAAGGGAAGG TGACCCCGTT TAAAATACCT
ACGCTGCAGG AAGCTTTGGA ATGGGGAAAA GATAAGACTA TTTTTAACCT GGACAATAAG
GGTATCCCAT GGCAAAAGTA TGTAAATATG CTTAAAGACG GGCAATATCC AAATATCGTG
CTAAGTGTAC GGTCGATGAA GGAAGCTTTA TTTTATTATG AGAAATTGGA TAAGGTCATG
TTATGTGTGG CTATTCAGAA CCAAACTGAT CTGGATGCCT TTATCGCTAC AAAAATCCCA
TTTAACCGGA TCATGGCTTA TGTGGGATAT ACGATGGAAC CGGCACATGA AAAAGTTTAT
ACCTATTTAC GTGACCGGGG GGTAATGTGC TTTATTTCTA TCCCTTCAAC CGCAGACAAA
AAACAAACGG ACTTAGAAAA AGTAAAAGCT TATTCTGAAG AACTGATCAA AAAGCCTGAT
ATTATAGAGA CAGACTACCC TGCACTTTTT ATGAATGGAA AATAA
 
Protein sequence
MYKINRKSIG CIVAFLLSSG ISIAQEQPMH TVKLTNFSEL QEYFHYQEGK PVIISGHRGG 
MLPGFPENTI EAMAKTLTIL PSFFEIDPRL TKDSALVLMH DATLDRTTTF KGKVSDYTYA
ELQKARVKDR EGKVTPFKIP TLQEALEWGK DKTIFNLDNK GIPWQKYVNM LKDGQYPNIV
LSVRSMKEAL FYYEKLDKVM LCVAIQNQTD LDAFIATKIP FNRIMAYVGY TMEPAHEKVY
TYLRDRGVMC FISIPSTADK KQTDLEKVKA YSEELIKKPD IIETDYPALF MNGK