| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3759 |
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| Symbol | |
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| ID | 8254891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4503788 |
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| End bp | 4504768 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644937421 |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003094012 |
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| Protein GI | 255533640 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATC TTACCATAAT CGTTCCGGAT GGGGAAAACA ACCTGAGCAG CATTGTAGGT
GCTTATAAAA TATTTTCGAG GGCCAACAAA TATTGGGTGG AAAACGGGAG AAAAGAATTG
TTCAAAATTC AGTTGGCCGG CATTTCAAAA AAAGTAGATT TTTACGATGG TTTATTCTCT
GTAACGCCAC ATACCCACAT TTCGGCAATA ACCAAGACCA ATCTCATCAT TATCCCTTCA
TTGAACCATA ATTATCTTAA AGCCATAACA GGGAACAAAT TGCTGGTAGA CTGGATTGAA
CAGCAATATA AGGATGGTGC CGAAATTGCC AGCATATGCA CAGGGGCATT TATGCTGGCC
TCTTCAGGCC TGCTGGATGG AAAAAGTTGT TCTACACATT GGGCGGCAGC GGATAATTTC
AGAAGTATGT TCCCTAAAGT AAATTTACAG ACGGACCAGC TGATTACTGA TGAAAACGGG
ATTTATACGA ATGGTGGCGC TTATTCTTTT CTGAACCTGA TGATTTATCT TATAGAGAAG
TATTACGACA GGCAAACAGC AATTTTTTGT TCCAAAGTAT TTCAGATTGA AATAGACAGG
CAAAGCCAGT CGGCATTTAC CATATTTACC GGCCAGAAAT TACATGGGGA TGAAATGGTA
AAGAAAGCGC AGGCTTATAT CGAAAGTAAA CTGGACGAAA AAATATCTGT TGAACATTTG
TCAGCCAGCT TCTCGGTTGG CCGCAGGAAC TTTGACAGAA GGTTTATTAA AGCTACAGGG
AATACCCCTG TTGAATATGC ACAGCGGGTA AAAATTGAAT CCGCAAAAAA AGCGCTGGAA
ACCAGTTGTA AAACAATTAA TGAAGTGATG TATGGCGTAG GCTATTCGGA TGTGAAGGCC
TTTCGTGAAG TATTTAGAAA AATCACTGGT ATGTCGCCTT TGGAATACAG GGGCAGATAC
AACAAGGAGG CTGCAAGATA A
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| Protein sequence | MKHLTIIVPD GENNLSSIVG AYKIFSRANK YWVENGRKEL FKIQLAGISK KVDFYDGLFS
VTPHTHISAI TKTNLIIIPS LNHNYLKAIT GNKLLVDWIE QQYKDGAEIA SICTGAFMLA
SSGLLDGKSC STHWAAADNF RSMFPKVNLQ TDQLITDENG IYTNGGAYSF LNLMIYLIEK
YYDRQTAIFC SKVFQIEIDR QSQSAFTIFT GQKLHGDEMV KKAQAYIESK LDEKISVEHL
SASFSVGRRN FDRRFIKATG NTPVEYAQRV KIESAKKALE TSCKTINEVM YGVGYSDVKA
FREVFRKITG MSPLEYRGRY NKEAAR
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