Gene Phep_3756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3756 
Symbol 
ID8254888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4501211 
End bp4502440 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content46% 
IMG OID644937418 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003094009 
Protein GI255533637 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGAT CATTAAAATA CCGCAATTTC AAGCTCTTCT TTTATGGACA ATCTATCTCC 
CTTATAGGAA CCTGGATGCA GAAGACGGCG GTAAGCTGGC TGGTGTACAG GCTAACCGAT
TCGGCCATGA TGTTGGGCCT GGTAGGTTTT GTAAGCTTAA TCCCCTCACT CTTTCTTTCG
CCTTATGCCG GGAGCCTGAT CGACAGACAC AACCGCTATA AAATCCTGCT GATCACCCAG
GTGGTCTCGA TGCTCCAGGC GGGGGCTTTG GCTGCTTTAA TTTTCTTTAA GTATTATCAT
ATTCCTTTTA TTATCTTTTT AAGCCTTGTT CAAGGCATTA TTAACGCTTT TGATGTTACC
TGCCGACAAT CGCTTATGGT AGAAATGGTA GAGGACAAAG CCGACCTGCC TAATGCGATT
GCCCTGAATT CTACCATGGC CAATCTGGCA CGCATTGTAG GCCCGGCTAT TGCAGGGGTG
ATACTCAGTA CCTTTGGCGA AGACTTCTGC TTTGTGGGCA ACTTTGTAAG TTATGTGCCG
GTACTGATCT GTCTGCTGAT GATGAATCTG AATATCACTG TAATGCCCCA CGGACAGAAA
AGCATATGGA CAGAACTTGA AGAAGGTTTT AAATACATAT CCGGGGATAA GGACCTGAGC
AGTATGATTG TCATGATCGG GATAAGCAGT CTGTTCGTCA TCCCCTTCAA TACTTTAATG
CCTATTTTTG CCAAAACCAT TTTCAATGGT GATGCCGGCA CCTTCAGTTG GTTTGAAAGT
GCCGCAGGTC TTGGATCGGT TGTAGCTGCT ATGTACCTGG CCAATTTAAA ATCGGCCAAA
CCGATGATGA GGATCAGCAT CATCGCCAGT GCTATATTTG GCTTAAGCCT GGTACTCCTG
TCCTACTCAG GGATACTACC TATTGCACTT GTATTCATGA CTTTAAGTGG ATTGGGCATG
ATGGCACAAA CCTCTTCTAT CAATACCTAT ATTCAAACCC ATGCCATACC CGAAATGAGG
GGCAGGGCAA TCAGTTATTA TGTAATGGCC TATCAGGGCA TGATCCCCAT CGGCAGCCTG
CTCATTGGCT GGACGGCAGA TGCATTTGGT TCCAGAATGG CGGTTTGCAT AGCCGGACTG
ATTGGGCTCG GGGCTACGGT ATCATTTGTG CTGTATAAAA GCAGGTTCTC CAGCCGCAGG
ATCTCAGCAT TGATATTACA TCATAAATAA
 
Protein sequence
MFRSLKYRNF KLFFYGQSIS LIGTWMQKTA VSWLVYRLTD SAMMLGLVGF VSLIPSLFLS 
PYAGSLIDRH NRYKILLITQ VVSMLQAGAL AALIFFKYYH IPFIIFLSLV QGIINAFDVT
CRQSLMVEMV EDKADLPNAI ALNSTMANLA RIVGPAIAGV ILSTFGEDFC FVGNFVSYVP
VLICLLMMNL NITVMPHGQK SIWTELEEGF KYISGDKDLS SMIVMIGISS LFVIPFNTLM
PIFAKTIFNG DAGTFSWFES AAGLGSVVAA MYLANLKSAK PMMRISIIAS AIFGLSLVLL
SYSGILPIAL VFMTLSGLGM MAQTSSINTY IQTHAIPEMR GRAISYYVMA YQGMIPIGSL
LIGWTADAFG SRMAVCIAGL IGLGATVSFV LYKSRFSSRR ISALILHHK