Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3749 |
Symbol | |
ID | 8254881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4490903 |
End bp | 4491340 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644937411 |
Product | transcriptional regulator, Rrf2 family |
Protein accession | YP_003094002 |
Protein GI | 255533630 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTCTA AGAAAACGAA ATATGCAATA AAGGCACTGG TTGCTCTTGG CAAAAACAGA GAAAATCCTC CCATGCAAAT AGTAAGGCTT GCGGAGCAGG AAATGATCCC CAGAAAATTT CTGGAGCAGA TCCTGTTGGA TATGCGTAAT GCAGGTTATT TGTATAGTAA AAAGGGAGCC GGCGGGGGGT ATAGCCTAAA TAAGGAACCA AATGAAATTT ACCTGGCCGA TATACTCCGT ATTACCGATG GGCCTATCGC CATGGTGCCT TGTGCAAGTT TAAAGTTTTA CCGTAAATGC GATGAATGCC ATGATGAAGT GACCTGTGGC ATCAGAAAAA CATTTATTGA TGTCAGGGAT GCCACGCTTA AAGTTCTTGC CCAAACTACC ATTGCAGATG TGATCGCGAG AGAAACAGAT GACACACTGG TGCGTTAA
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Protein sequence | MLSKKTKYAI KALVALGKNR ENPPMQIVRL AEQEMIPRKF LEQILLDMRN AGYLYSKKGA GGGYSLNKEP NEIYLADILR ITDGPIAMVP CASLKFYRKC DECHDEVTCG IRKTFIDVRD ATLKVLAQTT IADVIARETD DTLVR
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