Gene Phep_3749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3749 
Symbol 
ID8254881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4490903 
End bp4491340 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content44% 
IMG OID644937411 
Producttranscriptional regulator, Rrf2 family 
Protein accessionYP_003094002 
Protein GI255533630 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCTA AGAAAACGAA ATATGCAATA AAGGCACTGG TTGCTCTTGG CAAAAACAGA 
GAAAATCCTC CCATGCAAAT AGTAAGGCTT GCGGAGCAGG AAATGATCCC CAGAAAATTT
CTGGAGCAGA TCCTGTTGGA TATGCGTAAT GCAGGTTATT TGTATAGTAA AAAGGGAGCC
GGCGGGGGGT ATAGCCTAAA TAAGGAACCA AATGAAATTT ACCTGGCCGA TATACTCCGT
ATTACCGATG GGCCTATCGC CATGGTGCCT TGTGCAAGTT TAAAGTTTTA CCGTAAATGC
GATGAATGCC ATGATGAAGT GACCTGTGGC ATCAGAAAAA CATTTATTGA TGTCAGGGAT
GCCACGCTTA AAGTTCTTGC CCAAACTACC ATTGCAGATG TGATCGCGAG AGAAACAGAT
GACACACTGG TGCGTTAA
 
Protein sequence
MLSKKTKYAI KALVALGKNR ENPPMQIVRL AEQEMIPRKF LEQILLDMRN AGYLYSKKGA 
GGGYSLNKEP NEIYLADILR ITDGPIAMVP CASLKFYRKC DECHDEVTCG IRKTFIDVRD
ATLKVLAQTT IADVIARETD DTLVR