| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3737 |
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| Symbol | |
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| ID | 8254869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4461280 |
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| End bp | 4462593 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937399 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003093990 |
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| Protein GI | 255533618 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.315415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGTA GGGCTTTTAT GTTTGCCTTG GTGCTTTTGT GTACAGGTAC CGGGCTGGCT
TATGGACAGG AACAGTTGAG CCTGCAGGAA GCCATTGCTA CTGCACTTAA AAACAATTAT
GATATTAAAC TGGTAAATAA CGACATCCAG ATTGCTAAAA ATAATGTAAA CCCGGGAAAT
GCAGGCATGC TGCCCAGCCT GGACGGAAGT TTTAGTGATG GGGGAAGCCG CCAGAACATT
ACCAGGACAC AGAGCAATGG CAACCAGCAA ACGCTGGACG GGGTGAGAAA TACCAATATG
AGCTATGGCG CCTCGCTGGG CTGGACAATT TTTGATGGCT TACAGATGTT TACCAATTAT
GAACGGCTGA AAGAATTGCA AAAACAGGGG GAAGTGAACG CCAAAGCCAC TATTTTGACT
ACGGTGAGCA ATGTGATCAG CTCTTATTTT ACGGTATTAA AGGAGCAGCA ATTGGTTAGG
GCAAGGGATA CGGCACTCGA CATCTCGCAG CTGCGCTTAA GAATTGCAGA CAATAAACTG
GCTATTGGCA GGGGCTCTAA ACTGGATGTG CTGGCCGCAA AGGTTGACTA CAATACGGAT
ACTGCAGCTT ACCTGCAGGA AATTAACCTG TTGAAAACTG CAAAAACAGC TTTAAACCAG
GTAATGGCCA GAGACCTGAA TCTTGATTTT AAGGTGGATG AAGCAATTGA TATAGATTCG
AAACTGAATT ATGGCACTTT AGCCGGACAA ATGGAACAGT TAAACCCCGA CCTGCAAAAT
GCCTTTATCA GTAAAAAAAT TGCAGAGCTG AATTTAAAGC AGGTAAAAGG TCAGCGCTAC
CCAGTAGTAG GCGTAAATGG TGGTTATGAG TTTCAGAAAA GCGCCAGTCC GACCGGCTTT
AATACCCAGC AGCGTGCTAC GGGTTTTACA TATGGTCTTA CGGCAAGCCT GAATATCTTT
AACGGTTTTT TGCAAAGGCA AAACGAGCGC AATGCAAAGA TAGAGATCAA TTCATCTGCA
CTAATGCTGG ACAAGACAAA ACAGGACATC ACAGCCCAGC TGATCTCGAC CTATCAGAAC
TACAGTACCA ACCTGGATTT GCTGAAAGTG GAGCAAAACA ATGTAGACAT TGCCAAACAA
AACCTGGACA TTACACTGGA AAAATACCGC CTGGGCAGTA TTTCGCCACT GGAGTTAAGA
GAGGCGCAAA AAAACTCAAT TGATGCCATT ACCAGGTATC TGGAGGCGCA ATATCAGGCA
AAACTTACAG AAATCAGCCT AAAAGAAATC AGTGGTACTT TAAATATTCA ATAA
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| Protein sequence | MKSRAFMFAL VLLCTGTGLA YGQEQLSLQE AIATALKNNY DIKLVNNDIQ IAKNNVNPGN
AGMLPSLDGS FSDGGSRQNI TRTQSNGNQQ TLDGVRNTNM SYGASLGWTI FDGLQMFTNY
ERLKELQKQG EVNAKATILT TVSNVISSYF TVLKEQQLVR ARDTALDISQ LRLRIADNKL
AIGRGSKLDV LAAKVDYNTD TAAYLQEINL LKTAKTALNQ VMARDLNLDF KVDEAIDIDS
KLNYGTLAGQ MEQLNPDLQN AFISKKIAEL NLKQVKGQRY PVVGVNGGYE FQKSASPTGF
NTQQRATGFT YGLTASLNIF NGFLQRQNER NAKIEINSSA LMLDKTKQDI TAQLISTYQN
YSTNLDLLKV EQNNVDIAKQ NLDITLEKYR LGSISPLELR EAQKNSIDAI TRYLEAQYQA
KLTEISLKEI SGTLNIQ
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