| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3734 |
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| Symbol | |
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| ID | 8254866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4455123 |
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| End bp | 4456913 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644937396 |
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| Product | peptidase M61 domain protein |
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| Protein accession | YP_003093987 |
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| Protein GI | 255533615 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.393831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAAA CATCAATATT AGGATTGGTA ATATTACTAT TTGCAGGTAT GACAGCAAAA
TCGCAGGTTA AAATAAGATT CGATATCAGT TTTACAGAGC CCCAGGCGCA CTATACGGAG
GTAGAAATGA ACATTTCAGG CCTGGTTAAA GATTATATAG ATATAAAAAT GCCGGTATGG
GCCCCGGGTT CGTACCTGGT GCGCGAATTT GCTAAAAGTG TGGAAGGTTT TGGGGCTACG
GCCAATGGCA AAATCCTTAA ACATGAAAAG GTGAGAAAAA ACACCTGGAG GGTGTATACC
GCTAAAGCGA ATGCCCTTAA AATTAAGTAC AGGGTATATG CTTTTGAAGT TTCGGTGCGT
ACATCTTTTA TTGATGAAAG CCATGCGTTT TTGTCGAGCA GCGGTATATT TATGTACCCT
GAGGGTTTGC TTAAAACACC GAGTACAGTA AAGATCAACC CTTATAAAGG CTGGACTAAA
GTATCTACCG GACTGGAACC GGTTTCGGGG CAGCAATTTA CCTATACCGC TGCCGATTTT
GACATTTTGT TCGACAGCCC TATTGAAGTA GGTAACCAGG ATGTTTTTGA ATTTATGGCC
TCGGGGCTTA AACATGAAGT GGCCATGTAC GGCGGCGGGA ATTATGATAA GGAGCGCCTT
AAAGTGGATA TGGCCAAAAT TGTGGAGCAG GGAACGGCCA TTTATGGCGA AAACCCGAAT
AAGCATTATA CTTTTATTGT CCATAATTTT TCTTCCGGTG GCGGCGGTCT GGAACACCTG
AACTCTACGG TACTGGGTGC AAAACGCGAT GCTTATGTTA CTGAAACCGG CTATAAAGGC
TTTTTAGAGC TGGTTGCGCA CGAGTATTAT CATTTATGGA ACGTAAAAAG GATGCGCCCT
GTGGCCTTAG GCCCCTTTGA TTACGACAAT GAGAACTATA CCACCAATTT ATGGATAGCA
GAGGGTTTTA CCGCCTATTA CGAAAATAAA CTGATGCTGC GTGCTGGTTT TACAGACGAG
AAAGGCTTTG TAGATGCACT GGTTACGGCA GTAAGCAATG TTTCCAATAC CCCAGGCAAC
AAGGTGCAGT CGGTTGCCGA AGCCAGTTAC GATGCCTGGA TCAAATATTA CAGGCCTAAT
GAAAATTCGA ACAACACTAC AGTTTCTTAT TATGCCAAGG GCGAGGTAGT AGGCTTATTG
ATGGACCTGG AAATAGCCCA TGCCACAAAA GGTACTAAAA GTCTGGACGA TGTGATGAAA
GCCATGTACC TGCAAAATAA AGCACAAAAA AGAGGGTATA CCGATGCAGA ATTTAAGGCT
ATGGTAGAAA AGATCAGCGG AGCCAGCTTT ACAGATTTCT GGGCTAAATA CGTGAATGGC
ACCACTGCAA TCGACTACCA TAAATATTTT GGCTATGCAG GTATCAACAT AACCAATGAA
AATGAAGGTA AAAGTATCCC GTATTTGGGC ATTGCCACTA AAAATCAGGG AGGAAGGGTC
TTTATTACCA CAGTTTCACG CAATTCGGCG GCCTGGGTTG ACGGGCTCAA TGTGAATGAT
GAAGTGATCA GTGCAGATGG TGCCCCTGTT GAAATAGCGA TTGATAAAAT GGCCGCAGTT
GCCGGTAAAA AAGTTGGAGA GACGGTAACT TTTAAGGTAG CCAGAGATGG GATCCTTAAA
GACATTACAG TTACCCTTAA AGCCAGTCCG AACCTGAAAC TTGTGGGGCA GATAGACGAA
AAGGCCACAG AACTGCAAAA GGCAGTAAGG AAGGCCGTAT TGTTTAAATA A
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| Protein sequence | MIKTSILGLV ILLFAGMTAK SQVKIRFDIS FTEPQAHYTE VEMNISGLVK DYIDIKMPVW
APGSYLVREF AKSVEGFGAT ANGKILKHEK VRKNTWRVYT AKANALKIKY RVYAFEVSVR
TSFIDESHAF LSSSGIFMYP EGLLKTPSTV KINPYKGWTK VSTGLEPVSG QQFTYTAADF
DILFDSPIEV GNQDVFEFMA SGLKHEVAMY GGGNYDKERL KVDMAKIVEQ GTAIYGENPN
KHYTFIVHNF SSGGGGLEHL NSTVLGAKRD AYVTETGYKG FLELVAHEYY HLWNVKRMRP
VALGPFDYDN ENYTTNLWIA EGFTAYYENK LMLRAGFTDE KGFVDALVTA VSNVSNTPGN
KVQSVAEASY DAWIKYYRPN ENSNNTTVSY YAKGEVVGLL MDLEIAHATK GTKSLDDVMK
AMYLQNKAQK RGYTDAEFKA MVEKISGASF TDFWAKYVNG TTAIDYHKYF GYAGINITNE
NEGKSIPYLG IATKNQGGRV FITTVSRNSA AWVDGLNVND EVISADGAPV EIAIDKMAAV
AGKKVGETVT FKVARDGILK DITVTLKASP NLKLVGQIDE KATELQKAVR KAVLFK
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