| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3730 |
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| Symbol | |
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| ID | 8254862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4449461 |
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| End bp | 4450783 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937392 |
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| Product | OmpA/MotB domain protein |
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| Protein accession | YP_003093983 |
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| Protein GI | 255533611 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.331233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAA AATTATTTAA ATGTTTGCCT GTAGCTGTAG CGGCTTTGTT ACTGGGAGGT
ACTGCCCAGG CACAAGAAAA AATGAGTGCC GAAGCCAATC AGCTGTCGAC CTGGTCGATA
GGTGTAAACG CAGGGGTGCT TAGTCCGATT TCCCCATTGG GTGGCAAAAA CGATTTCTCG
AACTGGAAAA GCAGTCTGGG TTATGGCTTG TACATCAAGA AACAATTTAC ACCTTATTTC
TCTTTACGTT TAGACGGTGT GAGGGGTAAA TTAAAAGGAG ACAATTCGGA GGCCTGGGAC
GGTGGTGGTA CCAATGCAAG TCCGGTTAGC GCTTTTGAAA CAGACCTTTC TTATTCAGGA
AGTTTAAATG CTGTGGTTAA CCTGTTTAAC ATAGACATGT TTAACAAGAA CAGTGCAGTG
CAATTATATG CATCGGCGGG TGCTGGTTTA GCAGGTTATA AAGTTAAAAC TGCTGCAGGA
TCGGGTGCTT TAACGGATTA TGCTGGTGGC AAAACCATTA GCGAACTGAT CATTCCGGTA
GGTGTTGGTG CTAAATTTAA AGTAGCTGAA AAGGTAAACC TGGATCTGGG CTGGACCATT
AACTATGTTG ATGGCGATAA CCTGGATGGT TATTACCGTG GCAGCAATGA CAAGTACAAT
TATGCGTATG CAGGTCTGGA ATTTTCTTTA GGAAAAGGAA AGCAACTGGC ATGGCATAAT
CCTGTGGCTT TAACTTATGA CGAAGCCTTG CAGGCCAAAC AAACTGCCAA TGCATTAAAA
AGCGACCTGG ATGCCCAGAA AGCTGAGAAT GCAAGGTTAA GAACTGAGAT GAACGACCTG
TTGAAAGACA GTGACGGTGA TGGCGTGGCA GATAAACTGG ATAAATGTCC GGGTACACCT
GCAGGCGTTG TGGTTGATGG TTCGGGCTGT CCTTTAAAAG TACCTGCCCC GGTTGAGAAA
ATCATCATTA CAGAAGCCGA CCGCAAAGTG GTTGCCGATG CCATTAAAAA CTTAGAGTTT
GATTTGGGCA AAGCCACTAT CCGCCAGAAA TCTTATGCTA CATTGAACCG TGTTGCTGAA
CTGCTGATCC AGAAAAACTT TAGTTTGAAA CTGGCAGGAC ATACAGACAA TACAGGTTCT
GCAGCTTTAA ACATGCGTTT GTCTAAAGAC AGGGCAGAAT CGGTAAAAGC TTACCTGGTT
TCGCAGGGTG CAAATGCATC GCGTATTGAA GCTACAGGTT ATGGTATGAA CCAACCTATT
GCAAGCAATA AAACTGCTGC AGGTCGTCAG CAAAACAGAA GGGTAGAGTT TACCTTGTTC
TAG
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| Protein sequence | MKQKLFKCLP VAVAALLLGG TAQAQEKMSA EANQLSTWSI GVNAGVLSPI SPLGGKNDFS
NWKSSLGYGL YIKKQFTPYF SLRLDGVRGK LKGDNSEAWD GGGTNASPVS AFETDLSYSG
SLNAVVNLFN IDMFNKNSAV QLYASAGAGL AGYKVKTAAG SGALTDYAGG KTISELIIPV
GVGAKFKVAE KVNLDLGWTI NYVDGDNLDG YYRGSNDKYN YAYAGLEFSL GKGKQLAWHN
PVALTYDEAL QAKQTANALK SDLDAQKAEN ARLRTEMNDL LKDSDGDGVA DKLDKCPGTP
AGVVVDGSGC PLKVPAPVEK IIITEADRKV VADAIKNLEF DLGKATIRQK SYATLNRVAE
LLIQKNFSLK LAGHTDNTGS AALNMRLSKD RAESVKAYLV SQGANASRIE ATGYGMNQPI
ASNKTAAGRQ QNRRVEFTLF
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