| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3726 |
|---|
| Symbol | |
|---|
| ID | 8254858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 4446308 |
|---|
| End bp | 4447465 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644937388 |
|---|
| Product | AAA family ATPase |
|---|
| Protein accession | YP_003093979 |
|---|
| Protein GI | 255533607 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1373] Predicted ATPase (AAA+ superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGCT TTGTAACCAG GCAAATTGCA GCAAAAATAG AGCAGCAAAA AAACAAATTC
CCAATAATTG CCCTAACCGG TCCCCGGCAA TCGGGGAAAA CTACTTTGTT AAAAGAATTG
TTTAATGACT ACAGGTATGT ATCCCTGGAG AATCCGGATG TTCGGGCATT TGCAACAGAT
GATCCTGTTG GCTTTTTAAA ATTATACAAT GAGCGGGTAA TTTTTGACGA GGTACAACGC
GCACCGGGTC TTTTTTCTTA CATCCAGGGT ATTGTAGATG ACAGTGGGCA GATGGGGCAG
TTTATTTTAT CCGGTTCTCA AAATTTTCAC CTCTTAAACA GCATCACACA AACCCTGGCC
GGTCGTGTGG CTTTATTTAA GCTATTGCCC TTTGATTTTT CTGAACTAAA AGGCGCGGGT
ATTCCAAACG TATCCTACGC CGAAACCGCA GTAAAAGGCT TTTATCCCGC TATATATACA
CGCGAAATAG ATCCGGTTGT ATTTTATGCC AATTATGTAC AAACCTATAT TCAAAAGGAT
GTAACCGAAT TGCTCAACAT TCGGGACATC AGCTTATTCC GCACTTTTTT AGGCTTATGT
GCCGGCCGTG CGGGGCAACT GTTAAACATC AATGCATTGG CTAACGAATG TGACATTTCA
CAGCCCACTG CAAAGGCTTG GTTATCTATC CTGGAAAGCA GCTATATTAC ATTCCAATTA
CAGCCCTATT ACCAAAACTT CAACAAACGT TTGGTAAAAA CCCCAAAGCT CTATTTTTAC
GACACGGGCC TGCTCAACCA CTTACTAGGT ATCAGATCGC CAGAAGATTT TGAACAGAAC
AGACTGAAAG GCAATCTTTT TGAAAATATG ATCATTGCCG AATTCCAAAA GAAAAATTAC
CACCAATACC TGCACAAGGA TTATAATTTT TGGCAGGACA GCAATAACCG GGAAGTAGAT
TTATTAATAA AAACCAACAA TGGCTTTGAT ATTTTTGAAA TCAAAGCCAC CCAAACCATT
TCCGCTTCCT TATTTAAAGA ACTGGACTAT TTTGAAGAAC TGACCCCAAA TCTAGTTATT
CAAAAAAACC TGATATATGG TGGTGGTGAA GATCAGTCAC GCACCAAATA CAACGTGATC
AGCTGGAAAA ACATTTAA
|
|---|
| Protein sequence | MKGFVTRQIA AKIEQQKNKF PIIALTGPRQ SGKTTLLKEL FNDYRYVSLE NPDVRAFATD
DPVGFLKLYN ERVIFDEVQR APGLFSYIQG IVDDSGQMGQ FILSGSQNFH LLNSITQTLA
GRVALFKLLP FDFSELKGAG IPNVSYAETA VKGFYPAIYT REIDPVVFYA NYVQTYIQKD
VTELLNIRDI SLFRTFLGLC AGRAGQLLNI NALANECDIS QPTAKAWLSI LESSYITFQL
QPYYQNFNKR LVKTPKLYFY DTGLLNHLLG IRSPEDFEQN RLKGNLFENM IIAEFQKKNY
HQYLHKDYNF WQDSNNREVD LLIKTNNGFD IFEIKATQTI SASLFKELDY FEELTPNLVI
QKNLIYGGGE DQSRTKYNVI SWKNI
|
|---|
| |