| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3724 |
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| Symbol | |
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| ID | 8254856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4443242 |
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| End bp | 4445605 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644937386 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_003093977 |
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| Protein GI | 255533605 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACA AAAAAATAAA TAGAGTAGCG GTATTGGGCT CTGGTATTAT GGGTTCGCGC
ATTGCCTGTC ACTTTGCCAA CATCGGCGTA GAAGTGCTGC TGCTTGATAT TGCCGCAAAA
GAAGGAGATA AGAACAGTAT TGTAAATACA GCGCTGCAAA CTGCAGTAAA AACCAACCCT
TCTCCGGTTT ATTCAAAAAA AGTTCTGACT AATATTGCGA CCGGAAATTT TGAAGACGAT
ATGTCTAAAA TTGCCGCTTA CGATTGGATC ATAGAGGTTG TGGTAGAAAA TCTTGACATC
AAGAAAAAGG TGTTTGAACA GGTAGAACAG TACCGTAAGC CTGGCACACT GGTTACTTCA
AATACATCAG GAATCCCCAT TCATTTAATG GCCGAGGGCA GAACGGATGA TTTTAAGGCC
AACTTTTGCG GAACACACTT TTTTAATCCG CCCCGCTATT TAAGGTTACT GGAAATTATT
CCTACTCCGC ATACAAGACC TGAGCTGGTC GACTTTTTAA TGCATTATGG TGATAAATTT
TTGGGCAAGA CTACCGTTTT GTGTAAAGAT ACACCGGCAT TTATTGCCAA TCGTGTAGGG
GTTTATTCGA TTATGGCCCT GCTGCACCTG GTAGAAAAAA TGGACCTTAC CGTAGAGGAG
GTAGACAAGT TTACCGGACC TGCATTGGGT AGGCCAAAAT CGGCTACTTT CCGCACTACC
GATGTGGTTG GCCTGGATAC CATGATCAAG GTAGCTAAAG GACTGTATGA CAACTGCCCG
GATGACAAGG CGCATGAGCT GTTTAAACTG CCGGGATATG TAGAAAAGAT GGAAGCCAAT
AAATGGCTGG GCGATAAAAC CGGACAGGGT TTTTACAAAA AAACAAAATC TGCCGAAGGC
AAAACAGAAA TACTGGCGCT TGACCTGAAA ACGATGGAAT ACCGTCCACA GGAAAAAGTG
AAATCGGCTA CGCTGGAGCT GACCAAGCCA ATTGAACAGG TACGCGACCG GATGAAGGTG
TTTGCGGCAG GAAAAGATAA AGCAGCTGAA TTGTTCAGGG CCTCGTTTTT TGGGCTGTTT
GAATATGTAT CGGACAGGAT CCCTGAAATT TCGGATGAAC TGTACAGAAT TGATGATGCC
ATGCGTGCGG GATTTGGATG GGAGCTGGGG CCTTTTGAGG TTTGGGATGC TGTAGGTGTT
GCCGAGGCCA TTGAAGGCAT GAAAAAGTAT GGACACGAGG CTGCGGCCTG GGTGCATGAA
ATGCTGGCGG CCGGAAATAC ATCGTTTTAC AGGATAGAAG ATGGGGTTCG CAAATATTAT
GATATCCCGA CTAAAAGCTA TAAAGCGGTG CCGGGTGCAG AGGCTTTTAT CATTCTGGAT
AACTTAAGGG CCAGCAAGGT GCTCTGGAAA AATTCGGGGG CCTCTATTAT TGACCTGGGT
GACGGGATCA TCAATGTGGA ATTCCACTCT AAGATGAATA CCATTGGCGG CGATACTTTG
CAGGCCATAA ATAAAGCCAT TGATATGGCA GAAAAAGATT ACAAAGGGCT GGTGATTGGC
AATGACGGCG CCAATTTTTC GGCCGGCGCC AATGTAGGGA TGATCTTTAT GATGGCGGTA
GAGCAGGAAT GGGAAGAGCT GAACATGGCC ATCCGCTTAT TCCAGAATAC CTCTATGCGC
ATCAGGTATT CTTCTATTCC GGTAGTGGTA GCCCCGCACA ATTTAACTTT GGGCGGGGGT
TGCGAGTTTA GTTTGCATGC CGACCATGTA CAGCTCAATG CTGAAACGTA TATGGGCCTG
GTTGAGTTTG GTGTAGGGGT AATTCCCGGC GGGGGTGGTA CTAAAGAGTT CGCTTTGCGT
GCATCTGATG AATATAAGGA TGATCAGATT GTTCAGAATG TGCTTAAGGA CAGGTTTTTA
ACTATAGGTA TGGCTAAGGT GTCTACATCG GCTGTTGAGG CTTTTGAGTT GGGTTATCTT
CAAAAAGGCA AGTATGCTAT TTCCATGAAC AGGAGCAGGT TAATTGCTGA TGCTAAAGCC
AAGGCAATTG AACTTGCAGA TGCGGGTTAT ACGCAGCCGG TTAGACGGAA AGATATTAAA
GTGTTGGGTA AGCAGGGTTT AGGTATTGTG TATGCCGGTG CCAATACCAT GTACTCTGGT
CATTATATTT CTGAACATGA TAAAAAGATT TCAGAGAAAC TGGGCTGGGT GATGTGTGGA
GGTGACCTTT CTTCGCCAAC AGAGGTAACG GAACAGTATT TACTGGATTT GGAAAGAGAA
GTGTTTTTAT CACTTTGTGG GGAAAGAAAA ACGCTGGAGC GCATCCAGAG TATTGTAACT
AAAGGCAAAC CGTTAAGGAA TTAA
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| Protein sequence | MMNKKINRVA VLGSGIMGSR IACHFANIGV EVLLLDIAAK EGDKNSIVNT ALQTAVKTNP
SPVYSKKVLT NIATGNFEDD MSKIAAYDWI IEVVVENLDI KKKVFEQVEQ YRKPGTLVTS
NTSGIPIHLM AEGRTDDFKA NFCGTHFFNP PRYLRLLEII PTPHTRPELV DFLMHYGDKF
LGKTTVLCKD TPAFIANRVG VYSIMALLHL VEKMDLTVEE VDKFTGPALG RPKSATFRTT
DVVGLDTMIK VAKGLYDNCP DDKAHELFKL PGYVEKMEAN KWLGDKTGQG FYKKTKSAEG
KTEILALDLK TMEYRPQEKV KSATLELTKP IEQVRDRMKV FAAGKDKAAE LFRASFFGLF
EYVSDRIPEI SDELYRIDDA MRAGFGWELG PFEVWDAVGV AEAIEGMKKY GHEAAAWVHE
MLAAGNTSFY RIEDGVRKYY DIPTKSYKAV PGAEAFIILD NLRASKVLWK NSGASIIDLG
DGIINVEFHS KMNTIGGDTL QAINKAIDMA EKDYKGLVIG NDGANFSAGA NVGMIFMMAV
EQEWEELNMA IRLFQNTSMR IRYSSIPVVV APHNLTLGGG CEFSLHADHV QLNAETYMGL
VEFGVGVIPG GGGTKEFALR ASDEYKDDQI VQNVLKDRFL TIGMAKVSTS AVEAFELGYL
QKGKYAISMN RSRLIADAKA KAIELADAGY TQPVRRKDIK VLGKQGLGIV YAGANTMYSG
HYISEHDKKI SEKLGWVMCG GDLSSPTEVT EQYLLDLERE VFLSLCGERK TLERIQSIVT
KGKPLRN
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