Gene Phep_3717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3717 
Symbol 
ID8254849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4435223 
End bp4436170 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content40% 
IMG OID644937379 
Productregulatory protein MerR 
Protein accessionYP_003093970 
Protein GI255533598 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTATAA ATGTTAAACA AAAGTTGTAT TTTAAACAAA GTTGTTTAAC ATTTGTTGTT 
ATAAATAATG TGAAGAAATA TTCAATTAGT GATATAGAAA GTCTGATAGG CATAAAGGCA
CACACCATAA GGGCCTGGGA GACCAGGTAT AACCTGGTGC CGCCTAAACG TACCCCTACC
AATATCAGGT ATTACGATGA GGATGACCTG AAAATGCTGC TTAATATTGT AGCCTTAAAT
GAAAACGGAT ACAAGATCAG CAGGATTGCC AAGCTGAGCA GGCAACAGGT ATCAGATCTG
GTGCGGCAGT TAGATTCCGA TTGGGGAAAT GAGAGCATCC AGTTGCTGAA CCTTTCAGAT
GCTACCCTTA AGTATGATGA AAATGAGTTT TCAAGAATAC TTACGGGCTG TATTGATGAA
ATGGGTTTGG TCAAAACTAT GGACCTGGTG CTGTTCCCCT TTATGAAACG TGTAGGAATG
CTGTGGCAAA CAGGAACCAT AGACCCTTCA CACGAGCATT TTGCTTCCAG TCTGATCAGG
GACAAGATCA TTGTGAAAAT CGATAAGCTG GAAAAACCAA GGAAGAAAAA AGTACTGCGG
TTTGTGCTTT TCCTGCCCGA AGCAGAAATG CATGAAACAG GTCTGCTCTT TGCCAGGTAT
CTGTTAAAAA AATGCGGACA TGAAACACTT TACCTGGGGT CGGAAATTCC CTATGCAGAT
ATTAAAAAAG TGATCAGCGG CTATAAACCT GATTATGCAT TTATTGTTTT GACCTCGCTT
AACCTGGGAA AGGACCTCAA CAAGATTATA GAAAAAGTAA TGGATTATGT AGAGGTGCCC
TTGCTGGTTG CAGGAAGTCT GATCTCTGAA TTTGACATTC TTGTAAAAGA TAGGCTTACC
CCTTTGAAGA ATGTTTGTGA CATGGTCGAA TTTCTTGAAG AATTATAA
 
Protein sequence
MLINVKQKLY FKQSCLTFVV INNVKKYSIS DIESLIGIKA HTIRAWETRY NLVPPKRTPT 
NIRYYDEDDL KMLLNIVALN ENGYKISRIA KLSRQQVSDL VRQLDSDWGN ESIQLLNLSD
ATLKYDENEF SRILTGCIDE MGLVKTMDLV LFPFMKRVGM LWQTGTIDPS HEHFASSLIR
DKIIVKIDKL EKPRKKKVLR FVLFLPEAEM HETGLLFARY LLKKCGHETL YLGSEIPYAD
IKKVISGYKP DYAFIVLTSL NLGKDLNKII EKVMDYVEVP LLVAGSLISE FDILVKDRLT
PLKNVCDMVE FLEEL