Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3717 |
Symbol | |
ID | 8254849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4435223 |
End bp | 4436170 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644937379 |
Product | regulatory protein MerR |
Protein accession | YP_003093970 |
Protein GI | 255533598 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTATAA ATGTTAAACA AAAGTTGTAT TTTAAACAAA GTTGTTTAAC ATTTGTTGTT ATAAATAATG TGAAGAAATA TTCAATTAGT GATATAGAAA GTCTGATAGG CATAAAGGCA CACACCATAA GGGCCTGGGA GACCAGGTAT AACCTGGTGC CGCCTAAACG TACCCCTACC AATATCAGGT ATTACGATGA GGATGACCTG AAAATGCTGC TTAATATTGT AGCCTTAAAT GAAAACGGAT ACAAGATCAG CAGGATTGCC AAGCTGAGCA GGCAACAGGT ATCAGATCTG GTGCGGCAGT TAGATTCCGA TTGGGGAAAT GAGAGCATCC AGTTGCTGAA CCTTTCAGAT GCTACCCTTA AGTATGATGA AAATGAGTTT TCAAGAATAC TTACGGGCTG TATTGATGAA ATGGGTTTGG TCAAAACTAT GGACCTGGTG CTGTTCCCCT TTATGAAACG TGTAGGAATG CTGTGGCAAA CAGGAACCAT AGACCCTTCA CACGAGCATT TTGCTTCCAG TCTGATCAGG GACAAGATCA TTGTGAAAAT CGATAAGCTG GAAAAACCAA GGAAGAAAAA AGTACTGCGG TTTGTGCTTT TCCTGCCCGA AGCAGAAATG CATGAAACAG GTCTGCTCTT TGCCAGGTAT CTGTTAAAAA AATGCGGACA TGAAACACTT TACCTGGGGT CGGAAATTCC CTATGCAGAT ATTAAAAAAG TGATCAGCGG CTATAAACCT GATTATGCAT TTATTGTTTT GACCTCGCTT AACCTGGGAA AGGACCTCAA CAAGATTATA GAAAAAGTAA TGGATTATGT AGAGGTGCCC TTGCTGGTTG CAGGAAGTCT GATCTCTGAA TTTGACATTC TTGTAAAAGA TAGGCTTACC CCTTTGAAGA ATGTTTGTGA CATGGTCGAA TTTCTTGAAG AATTATAA
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Protein sequence | MLINVKQKLY FKQSCLTFVV INNVKKYSIS DIESLIGIKA HTIRAWETRY NLVPPKRTPT NIRYYDEDDL KMLLNIVALN ENGYKISRIA KLSRQQVSDL VRQLDSDWGN ESIQLLNLSD ATLKYDENEF SRILTGCIDE MGLVKTMDLV LFPFMKRVGM LWQTGTIDPS HEHFASSLIR DKIIVKIDKL EKPRKKKVLR FVLFLPEAEM HETGLLFARY LLKKCGHETL YLGSEIPYAD IKKVISGYKP DYAFIVLTSL NLGKDLNKII EKVMDYVEVP LLVAGSLISE FDILVKDRLT PLKNVCDMVE FLEEL
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