| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3701 |
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| Symbol | |
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| ID | 8254833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4414511 |
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| End bp | 4415041 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 644937363 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003093954 |
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| Protein GI | 255533582 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.306348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAAAAA ATGAGTTCAA CCTACAGCTT CACAATCATT CTGTTTCTTT ACAATCATTC
GCTTTAAATT TTACCAAAGA CATCGAAGAT GCAAATGATC TGGTTCAAGA TACTATGCTA
AAGGCGGTTA CCTATTATGG GAAGTTTAAA GAAGGCACCA ATTTAAAAGG ATGGCTGTTT
ACAATTATGA AGAATACCTT CATTAATAAT TACAGGCGCC TGGTGAAAAC CAATGCACTG
ATTACGAAAT CTGATGACAT TTCATCTGCA AACCTGCATT ATAGTGCAAC CAAAAATTCC
AGTGAAAGCA AATTTATTAT AGGAGATATT AATAAGGCAT TAGCCACGCT GCAACCCGAA
TATTATATAC CTTTTGTTAA GTATTTTGAA GGATATAAAT ACCATGAAAT TGCAGAAATG
CTTGAAATTC CAATAGGAAC GGTAAAAACC AGGATCCATG TTGCCCGGCA AATCCTTAAA
AAATACCTGA AAACCTATTC AAAAGATATT TTGGGTACGG AAGTGATGTA A
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| Protein sequence | MTKNEFNLQL HNHSVSLQSF ALNFTKDIED ANDLVQDTML KAVTYYGKFK EGTNLKGWLF
TIMKNTFINN YRRLVKTNAL ITKSDDISSA NLHYSATKNS SESKFIIGDI NKALATLQPE
YYIPFVKYFE GYKYHEIAEM LEIPIGTVKT RIHVARQILK KYLKTYSKDI LGTEVM
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