| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3691 |
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| Symbol | |
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| ID | 8254822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4404713 |
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| End bp | 4405321 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644937352 |
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| Product | RNA polymerase sigma-70 factor |
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| Protein accession | YP_003093944 |
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| Protein GI | 255533572 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.513254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATACAG ATCAACCGGA TACAAATGAT GACCATGCGC TGCTGATCAA ACTCAGGAAC
GGCGATCAGT TGGCCTTTGC AGAGATTTAC AACCTGTACA GAAGCAAAAT GTATACCTAT
GCCTGTAACC TATGCAAATC AACCGAGACT GCTGAAGAGA TTGTTCAGGA AGTATTTGTC
AGGATCTGGC AAAAAAAAGA CCAGATCAAT ACGGAGTTGA ATTTCGCTGC CTATATTAAA
AAGATCACAC TAAACCATGT GCTTAATCAT CTCAAAAAAA TTTCCCGCGA CAAGCAGCTT
CAGGAAGAAG TATTTCATTA CATAGCTACC ATCCGCAATA CAACAGAAGA CCATCTACTC
GAAAAAGAAC TGCTGAAAAC TTATGACGAG GCCATTGCTC TTTTACCACC TCAAAAGAAA
CTGATCTACC AAATGAGCCG CAATGAGGAA ATGACGCATG AGCAGATTGC AGAAAAGCTG
AACATTTCGA AGAACACGGT AAAAAACCAC ATGGTTGAGG CTACAAAATT CATCCGAAGT
TATGTAAGCA AGCACAGGGG GATCATCTGT TTTATTATTG CTTCTTCAAA TTATTTTCGG
CCCAACTAG
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| Protein sequence | MHTDQPDTND DHALLIKLRN GDQLAFAEIY NLYRSKMYTY ACNLCKSTET AEEIVQEVFV
RIWQKKDQIN TELNFAAYIK KITLNHVLNH LKKISRDKQL QEEVFHYIAT IRNTTEDHLL
EKELLKTYDE AIALLPPQKK LIYQMSRNEE MTHEQIAEKL NISKNTVKNH MVEATKFIRS
YVSKHRGIIC FIIASSNYFR PN
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