Gene Phep_3682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3682 
Symbol 
ID8254813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4394955 
End bp4395722 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content40% 
IMG OID644937343 
Productbeta-lactamase domain protein 
Protein accessionYP_003093935 
Protein GI255533563 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAAGTTT TCACTTTATA CGAAGGGTCT TATTCTGTAG CTGCCGATAA AAAGTTTATT 
CCTTTTAACC CGGAAACAGA TGATCCAAAA AGCAGACCAG CTTCTTTATT TATCCATATT
CAGCCCTTTC TTGTGCAGTT AAAAGATTCA CTGATTTTAT TTGATACCGG ATTGGGGTAT
AGCAATGAGG AAGGACAGCT CATCCTGCAT GAAAATATAA GAAAGGCAGG TTTTGATCCG
GAAGCTATAA ATATGGTGCT CATGTCGCAC CTGCATTTTG ATCATTCAGG TGGTATGGTC
CATCATCGGG CAGAAAAAAT GGGACTTAGC TTTCCCAATG CCAGTTATGT GATACAAAGG
GGAGAATGGG AAAGTGCATT TACAAATCCA TCTTCTTCTT ATAAAACGGA AATATTTGAA
TTCCTGCAAC GCAATGCACA ACTCATTTTT ATTGAAGGCT CGGGGCAGTT GACACCCGAG
ATCAGTTATG AACTGACAGG TGCCCATACC CCATTTCACC AGGTTTTTTT ATTGGATGAC
GGGGTCGATA AAGTGTTTTT TGGTGGTGAC GTTTTACCTG AGCCCGAAGA ACTTTTAAGA
AAGTTTATCG CCAAATATGA TTTTGATGGC AGAAAGGCAA TGGAATTAAG AGAAGAGTTT
GGTAAGAAGG CTGCGGCCGA AAACTGGAAC TGCCTGTTCT ATCATGCCAA AACAAAAGCA
TCTGGCCATG TAAGTTTAAC AGCTGAAGGA CAGTTTAAGA TCACTTAG
 
Protein sequence
MQVFTLYEGS YSVAADKKFI PFNPETDDPK SRPASLFIHI QPFLVQLKDS LILFDTGLGY 
SNEEGQLILH ENIRKAGFDP EAINMVLMSH LHFDHSGGMV HHRAEKMGLS FPNASYVIQR
GEWESAFTNP SSSYKTEIFE FLQRNAQLIF IEGSGQLTPE ISYELTGAHT PFHQVFLLDD
GVDKVFFGGD VLPEPEELLR KFIAKYDFDG RKAMELREEF GKKAAAENWN CLFYHAKTKA
SGHVSLTAEG QFKIT