Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3682 |
Symbol | |
ID | 8254813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4394955 |
End bp | 4395722 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644937343 |
Product | beta-lactamase domain protein |
Protein accession | YP_003093935 |
Protein GI | 255533563 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCAAGTTT TCACTTTATA CGAAGGGTCT TATTCTGTAG CTGCCGATAA AAAGTTTATT CCTTTTAACC CGGAAACAGA TGATCCAAAA AGCAGACCAG CTTCTTTATT TATCCATATT CAGCCCTTTC TTGTGCAGTT AAAAGATTCA CTGATTTTAT TTGATACCGG ATTGGGGTAT AGCAATGAGG AAGGACAGCT CATCCTGCAT GAAAATATAA GAAAGGCAGG TTTTGATCCG GAAGCTATAA ATATGGTGCT CATGTCGCAC CTGCATTTTG ATCATTCAGG TGGTATGGTC CATCATCGGG CAGAAAAAAT GGGACTTAGC TTTCCCAATG CCAGTTATGT GATACAAAGG GGAGAATGGG AAAGTGCATT TACAAATCCA TCTTCTTCTT ATAAAACGGA AATATTTGAA TTCCTGCAAC GCAATGCACA ACTCATTTTT ATTGAAGGCT CGGGGCAGTT GACACCCGAG ATCAGTTATG AACTGACAGG TGCCCATACC CCATTTCACC AGGTTTTTTT ATTGGATGAC GGGGTCGATA AAGTGTTTTT TGGTGGTGAC GTTTTACCTG AGCCCGAAGA ACTTTTAAGA AAGTTTATCG CCAAATATGA TTTTGATGGC AGAAAGGCAA TGGAATTAAG AGAAGAGTTT GGTAAGAAGG CTGCGGCCGA AAACTGGAAC TGCCTGTTCT ATCATGCCAA AACAAAAGCA TCTGGCCATG TAAGTTTAAC AGCTGAAGGA CAGTTTAAGA TCACTTAG
|
Protein sequence | MQVFTLYEGS YSVAADKKFI PFNPETDDPK SRPASLFIHI QPFLVQLKDS LILFDTGLGY SNEEGQLILH ENIRKAGFDP EAINMVLMSH LHFDHSGGMV HHRAEKMGLS FPNASYVIQR GEWESAFTNP SSSYKTEIFE FLQRNAQLIF IEGSGQLTPE ISYELTGAHT PFHQVFLLDD GVDKVFFGGD VLPEPEELLR KFIAKYDFDG RKAMELREEF GKKAAAENWN CLFYHAKTKA SGHVSLTAEG QFKIT
|
| |